RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ACTR5Q9H9F9 607 aaPredicted RBP25.78■■□□□ 1.72
TSKU-201ENST00000333090 LEMD3Q9Y2U8 911 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 POTEB3A0JP26 581 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 POTECB2RU33 542 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 DNM1LO00429 736 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 POTEBQ6S5H4 581 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 IRS2Q9Y4H2 1338 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 AHDC1Q5TGY3 1603 aaPredicted RBP25.78■■□□□ 1.72
TSKU-201ENST00000333090 CCDC172P0C7W6 258 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 DHX9Q08211 1270 aaKnown RBP25.77■■□□□ 1.72
TSKU-201ENST00000333090 TMC3Q7Z5M5 1100 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 NAV1Q8NEY1 1877 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 ARHGEF1Q92888 912 aaKnown RBP25.77■■□□□ 1.72
TSKU-201ENST00000333090 CCDC188H7C350 402 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 AGBL2Q5U5Z8 902 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 CACNA2D3Q8IZS8 1091 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 C3orf20Q8ND61 904 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 TRIM31Q9BZY9 425 aa25.77■■□□□ 1.72
TSKU-201ENST00000333090 BZW2Q9Y6E2 419 aaKnown RBP25.77■■□□□ 1.72
TSKU-201ENST00000333090 FLOT1O75955 427 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 IBSPP21815 317 aaPredicted RBP25.76■■□□□ 1.71
TSKU-201ENST00000333090 EXOC3L4Q17RC7 722 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 DAAM2Q86T65 1068 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 RBM46Q8TBY0 533 aaKnown RBP25.76■■□□□ 1.71
TSKU-201ENST00000333090 KDM3AQ9Y4C1 1321 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 ZBTB48P10074 688 aaPredicted RBP25.76■■□□□ 1.71
TSKU-201ENST00000333090 TM4SF1P30408 202 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 ANKRD20A8PQ5CZ79 823 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 DCAF17Q5H9S7 520 aaPredicted RBP25.76■■□□□ 1.71
TSKU-201ENST00000333090 NYXQ9GZU5 481 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 LRRC4CQ9HCJ2 640 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 ARMCX3Q9UH62 379 aaPredicted RBP25.76■■□□□ 1.71
TSKU-201ENST00000333090 NARFQ9UHQ1 456 aa25.76■■□□□ 1.71
TSKU-201ENST00000333090 PHF20L1A8MW92 1017 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 CASP5P51878 434 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 CCDC26Q8TAB7 109 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 BHMG1C9JSJ3 638 aaPredicted RBP25.75■■□□□ 1.71
TSKU-201ENST00000333090 CYP11B2P19099 503 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 IFFO1Q0D2I5 559 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 CPLX4Q7Z7G2 160 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 CLEC10AQ8IUN9 316 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 HAUS2Q9NVX0 235 aa25.75■■□□□ 1.71
TSKU-201ENST00000333090 PON1P27169 355 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 EDRF1Q3B7T1 1238 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 CYB5D1Q6P9G0 228 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 CCNL1Q9UK58 526 aaPredicted RBP25.74■■□□□ 1.71
TSKU-201ENST00000333090 AFPP02771 609 aaKnown RBP25.74■■□□□ 1.71
TSKU-201ENST00000333090 GKAP1Q5VSY0 366 aaPredicted RBP25.74■■□□□ 1.71
TSKU-201ENST00000333090 TCERG1LQ5VWI1 586 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 DPY19L2P1Q6NXN4 242 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 FUKQ8N0W3 1084 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 SLITRK6Q9H5Y7 841 aa25.74■■□□□ 1.71
TSKU-201ENST00000333090 UTP11Q9Y3A2 253 aaKnown RBP25.74■■□□□ 1.71
TSKU-201ENST00000333090 H2AFZP0C0S5 128 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 PPP4R3CPQ6ZMV5 832 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 H2AFVQ71UI9 128 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 LMBR1Q8WVP7 490 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 ATP8A1Q9Y2Q0 1164 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 F8VZ95 297 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 BYSLQ13895 437 aaKnown RBP25.73■■□□□ 1.71
TSKU-201ENST00000333090 CEP57Q86XR8 500 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 ZC3H3Q8IXZ2 948 aaKnown RBP25.73■■□□□ 1.71
TSKU-201ENST00000333090 GIMAP7Q8NHV1 300 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 MDM1Q8TC05 714 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 TATDN2Q93075 761 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 PSMD1Q99460 953 aa25.73■■□□□ 1.71
TSKU-201ENST00000333090 PAEPP09466 180 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 XRCC5P13010 732 aaKnown RBP25.72■■□□□ 1.71
TSKU-201ENST00000333090 SNCBQ16143 134 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 ASPRV1Q53RT3 343 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 HYIQ5T013 277 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 PARP9Q8IXQ6 854 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 TRIM51Q9BSJ1 452 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 C5orf60A6NFR6 353 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 PPP1R11O60927 126 aaPredicted RBP25.72■■□□□ 1.71
TSKU-201ENST00000333090 TPTE2Q6XPS3 522 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 VPS36Q86VN1 386 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 RASGEF1CQ8N431 466 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 CUL5Q93034 780 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 SUCLA2Q9P2R7 463 aaPredicted RBP25.72■■□□□ 1.71
TSKU-201ENST00000333090 DDX60LQ5H9U9 1706 aaKnown RBP25.72■■□□□ 1.71
TSKU-201ENST00000333090 FGGP02679 453 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 SCTRP47872 440 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 NT5DC3Q86UY8 548 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 U2AF1L4Q8WU68 220 aaKnown RBP25.72■■□□□ 1.71
TSKU-201ENST00000333090 JMJD4Q9H9V9 463 aa25.72■■□□□ 1.71
TSKU-201ENST00000333090 AJAP1Q9UKB5 411 aaPredicted RBP25.72■■□□□ 1.71
TSKU-201ENST00000333090 RPS6KA4O75676 772 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 STAT3P40763 770 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 NEDD9Q14511 834 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 ARSHQ5FYA8 562 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 ARMC9Q7Z3E5 817 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 SCLT1Q96NL6 688 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 MTMR4Q9NYA4 1195 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 MYH7BA7E2Y1 1941 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 PNMA6FA0A0J9YX94 578 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 FAM170AA1A519 330 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 POTEFA5A3E0 1075 aa25.71■■□□□ 1.71
TSKU-201ENST00000333090 POTEIP0CG38 1075 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms