RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 ME3Q16798 604 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 TJAP1Q5JTD0 557 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 MARCH8Q5T0T0 291 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 CKAP2LQ8IYA6 745 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 USP38Q8NB14 1042 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 DBF4BQ8NFT6 615 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 RDM1Q8NG50 284 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
CMTM1-203ENST00000333001 GTF3C6Q969F1 213 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 LENG9Q96B70 501 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 FAM167AQ96KS9 214 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 TEKT3Q9BXF9 490 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 CEP131Q9UPN4 1083 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 SAMM50Q9Y512 469 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 MAFBQ9Y5Q3 323 aaPredicted RBP13.86□□□□□ -0.19
CMTM1-203ENST00000333001 SQORQ9Y6N5 450 aa13.86□□□□□ -0.19
CMTM1-203ENST00000333001 TTC28Q96AY4 2481 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 MSH4O15457 936 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
CMTM1-203ENST00000333001 JAK3P52333 1124 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 NPY5RQ15761 445 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 LRCH2Q5VUJ6 765 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 RUFY4Q6ZNE9 571 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 CCDC60Q8IWA6 550 aaPredicted RBP13.85□□□□□ -0.19
CMTM1-203ENST00000333001 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 AIFM3Q96NN9 605 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 RAD9AQ99638 391 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
CMTM1-203ENST00000333001 NRBP2Q9NSY0 501 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 KCNJ14Q9UNX9 436 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 LIMCH1Q9UPQ0 1083 aa13.85□□□□□ -0.19
CMTM1-203ENST00000333001 GJB5O95377 273 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 CTDNEP1O95476 244 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 CHRNA1P02708 482 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 CA3P07451 260 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 KLRC1P26715 233 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
CMTM1-203ENST00000333001 TRIM29Q14134 588 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 PPP4R3AQ6IN85 833 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 MTHFD1LQ6UB35 978 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 ZSCAN31Q96LW9 406 aaPredicted RBP13.84□□□□□ -0.19
CMTM1-203ENST00000333001 MBOAT7Q96N66 472 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 DISC1Q9NRI5 854 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
CMTM1-203ENST00000333001 MICAL3Q7RTP6 2002 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 MAGEB2O15479 319 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 EDIL3O43854 480 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 PSMD10O75832 226 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 MYOGP15173 224 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 KRT2P35908 639 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 DEFB103AP81534 67 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 MGAT3Q09327 533 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 INF2Q27J81 1249 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 NEK8Q86SG6 692 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 NECAB1Q8N987 351 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 FAM20AQ96MK3 541 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
CMTM1-203ENST00000333001 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
CMTM1-203ENST00000333001 PRDM12Q9H4Q4 367 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.2
CMTM1-203ENST00000333001 GABBR1Q9UBS5 961 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
CMTM1-203ENST00000333001 CDY2AQ9Y6F7 541 aa13.83□□□□□ -0.2
CMTM1-203ENST00000333001 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 TBX3O15119 743 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 FDPSP14324 419 aaKnown RBP13.82□□□□□ -0.2
CMTM1-203ENST00000333001 LETM2Q2VYF4 491 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 FBXO47Q5MNV8 452 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 TSHZ1Q6ZSZ6 1077 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 MIER3Q7Z3K6 550 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 MYOCDQ8IZQ8 938 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 NSUN7Q8NE18 718 aaKnown RBP13.82□□□□□ -0.2
CMTM1-203ENST00000333001 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 FTHL17Q9BXU8 183 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 CELF4Q9BZC1 486 aaKnown RBP13.82□□□□□ -0.2
CMTM1-203ENST00000333001 SH2B1Q9NRF2 756 aaPredicted RBP13.82□□□□□ -0.2
CMTM1-203ENST00000333001 TRPV2Q9Y5S1 764 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 KDM3AQ9Y4C1 1321 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 WDR81Q562E7 1941 aa13.82□□□□□ -0.2
CMTM1-203ENST00000333001 EVPLQ92817 2033 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 MARCH6O60337 910 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 DKC1O60832 514 aaKnown RBP eCLIP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 BAG4O95429 457 aaKnown RBP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 TDP2O95551 362 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 GHRP10912 638 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 ATP4AP20648 1035 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 TMOD1P28289 359 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 TAP1Q03518 808 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 LPIN1Q14693 890 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 TCTN1Q2MV58 587 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms