RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 SPATA33Q96N06 139 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 PCYT2Q99447 389 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 MAFBQ9Y5Q3 323 aaPredicted RBP13.47□□□□□ -0.25
TRIM49B-201ENST00000332682 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 BACH1O14867 736 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 STBD1O95210 358 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 GH1P01241 217 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 YWHABP31946 246 aaKnown RBP13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 TCF7P36402 384 aaPredicted RBP13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 KCNB1Q14721 858 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 IQSEC1Q6DN90 963 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 DYMQ7RTS9 669 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 EMID1Q96A84 441 aaPredicted RBP13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 RUSC1Q9BVN2 902 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 RBSNQ9H1K0 784 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 RMND1Q9NWS8 449 aa13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
TRIM49B-201ENST00000332682 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 TMEM150BA6NC51 233 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 NKRFO15226 690 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 DKC1O60832 514 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 RHOBTB3O94955 611 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 RARRES1P49788 294 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 PRKCEQ02156 737 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 LAMC2Q13753 1193 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 UTP14CQ5TAP6 766 aaKnown RBP13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 RINT1Q6NUQ1 792 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 UNC13DQ70J99 1090 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 ANO5Q75V66 913 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 PPTC7Q8NI37 304 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 AFAP1L1Q8TED9 768 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 EMSYQ7Z589 1322 aa13.45□□□□□ -0.26
TRIM49B-201ENST00000332682 NPHP3-ACAD11A0A0J9YXS1 232 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ARHGEF35A5YM69 484 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 GOLGA6L3A6NEY3 463 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 FKTNO75072 461 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 LGR5O75473 907 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 CAVIN2O95810 425 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ATP4AP20648 1035 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 TNFAIP2Q03169 654 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 EHHADHQ08426 723 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 C1orf186Q6ZWK4 172 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 FAM200AQ8TCP9 573 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ZNF296Q8WUU4 475 aaPredicted RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ERO1AQ96HE7 468 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 REEP2Q9BRK0 252 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ANKEF1Q9NU02 776 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 KCND2Q9NZV8 630 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 NRBP1Q9UHY1 535 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 FRMD3A2A2Y4 597 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 GNRH1P01148 92 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 OATP04181 439 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 CYBAP13498 195 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 IDEP14735 1019 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ZNF165P49910 485 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 STAT5BP51692 787 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 GIT2Q14161 759 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 XKR3Q5GH77 459 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 ZNF658Q5TYW1 1059 aaPredicted RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 MFSD14CQ5VZR4 134 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 FAM160B1Q5W0V3 765 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 TRIM50Q86XT4 487 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 MLKLQ8NB16 471 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 TRPV1Q8NER1 839 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 AFG1LQ8WV93 481 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 EXOC1Q9NV70 894 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 GDAQ9Y2T3 454 aa13.44□□□□□ -0.26
TRIM49B-201ENST00000332682 KRT18P05783 430 aaKnown RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 HOXD8P13378 290 aaPredicted RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 HOXD10P28358 340 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 NPEPPSP55786 919 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 COASYQ13057 564 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 TRMT1LQ7Z2T5 733 aaKnown RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 OR6J1Q8NGC5 347 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 CCDC47Q96A33 483 aaKnown RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 LENG1Q96BZ8 264 aaPredicted RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 CCDC43Q96MW1 224 aaKnown RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 SH2D3AQ9BRG2 576 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 SEPT9Q9UHD8 586 aaPredicted RBP13.43□□□□□ -0.26
TRIM49B-201ENST00000332682 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms