RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PAPOLBQ9NRJ5 636 aaKnown RBP19.78■□□□□ 0.76
PKP3-201ENST00000331563 LMCD1Q9NZU5 365 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 COL24A1Q17RW2 1714 aa19.78■□□□□ 0.76
PKP3-201ENST00000331563 IRS2Q9Y4H2 1338 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 EIF4E1BA6NMX2 242 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 POLRMTO00411 1230 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 FUT2Q10981 343 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 ZSCAN10Q96SZ4 725 aaPredicted RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 ELAC2Q9BQ52 826 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 NEUROG2Q9H2A3 272 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 MYH6P13533 1939 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 C6orf229H3BNL8 230 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 ADAMTS3O15072 1205 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 RGL2O15211 777 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 VIMP08670 466 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 LINGO3P0C6S8 592 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 ROR2Q01974 943 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 DHX9Q08211 1270 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 RPS6KA1Q15418 735 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 SEC23AQ15436 765 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 RASGRP4Q8TDF6 673 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 CNOT10Q9H9A5 744 aaKnown RBP19.77■□□□□ 0.76
PKP3-201ENST00000331563 POLLQ9UGP5 575 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 PNMA2Q9UL42 364 aa19.77■□□□□ 0.76
PKP3-201ENST00000331563 DAPK3O43293 454 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 MMEP08473 750 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 FERP16591 822 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 ADRA2BP18089 450 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 MTA1Q13330 715 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 C1QTNF12Q5T7M4 302 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 MEI1Q5TIA1 1274 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 DDX47Q9H0S4 455 aaKnown RBP19.76■□□□□ 0.75
PKP3-201ENST00000331563 MCM9Q9NXL9 1143 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 MTMR7Q9Y216 660 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 UBR3Q6ZT12 1888 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 MYL1P05976 194 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 LDHBP07195 334 aaKnown RBP19.76■□□□□ 0.75
PKP3-201ENST00000331563 ECHS1P30084 290 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 COL23A1Q86Y22 540 aaPredicted RBP19.76■□□□□ 0.75
PKP3-201ENST00000331563 DYNLL2Q96FJ2 89 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 FAM167BQ9BTA0 163 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 KBTBD4Q9NVX7 518 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 RGL1Q9NZL6 768 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 GGT7Q9UJ14 662 aa19.76■□□□□ 0.75
PKP3-201ENST00000331563 TLDC2A0PJX2 215 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SMIM23A6NLE4 172 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SART1O43290 800 aaKnown RBP19.75■□□□□ 0.75
PKP3-201ENST00000331563 BLMHQ13867 455 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 PDIA5Q14554 519 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 CHADLQ6NUI6 762 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 PDXDC1Q6P996 788 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 B4GALNT2Q8NHY0 566 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
PKP3-201ENST00000331563 TBC1D5Q92609 795 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 CFAP73A6NFT4 308 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SPDYE3A6NKU9 549 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SCG2P13521 617 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 NAB2Q15742 525 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 ERMARDQ5T6L9 678 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 MTA3Q9BTC8 594 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 FAM129AQ9BZQ8 928 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 TRIM31Q9BZY9 425 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 DPH5Q9H2P9 285 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 GOPCQ9HD26 462 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 ATP8A1Q9Y2Q0 1164 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 GSTA1P08263 222 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 VEGFAP15692 232 aaPredicted RBP19.75■□□□□ 0.75
PKP3-201ENST00000331563 CHN1P15882 459 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 RIPK1Q13546 671 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 MAN2A1Q16706 1144 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 TRPM8Q7Z2W7 1104 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 TSC22D3Q99576 134 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 GOLPH3Q9H4A6 298 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SAP30BPQ9UHR5 308 aaKnown RBP19.75■□□□□ 0.75
PKP3-201ENST00000331563 SLC12A4Q9UP95 1085 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 STK38LQ9Y2H1 464 aa19.75■□□□□ 0.75
PKP3-201ENST00000331563 SSU72P8A0A1W2PR75 194 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 KIF4AO95239 1232 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 PLCG1P19174 1290 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 SFMBT2Q5VUG0 894 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 TMTC3Q6ZXV5 915 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 SPATA21Q7Z572 469 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 BAP1Q92560 729 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 EPAS1Q99814 870 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 CCDC194A0A1B0GVG4 234 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 A6NHS1 94 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 KCNJ2P63252 427 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 ASTE1Q2TB18 679 aaPredicted RBP19.74■□□□□ 0.75
PKP3-201ENST00000331563 CRY2Q49AN0 593 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
PKP3-201ENST00000331563 TGFBRAP1Q8WUH2 860 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 PRCCQ92733 491 aaPredicted RBP19.74■□□□□ 0.75
PKP3-201ENST00000331563 CRNKL1Q9BZJ0 848 aaKnown RBP19.74■□□□□ 0.75
PKP3-201ENST00000331563 SEMA6BQ9H3T3 888 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 ZNF219Q9P2Y4 722 aaPredicted RBP19.74■□□□□ 0.75
PKP3-201ENST00000331563 AMACRQ9UHK6 382 aa19.74■□□□□ 0.75
PKP3-201ENST00000331563 KRIT1O00522 736 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 GCLCP48506 637 aaPredicted RBP19.73■□□□□ 0.75
PKP3-201ENST00000331563 GNPTABQ3T906 1256 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms