RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 CRACR2AQ9BSW2 395 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ODF2LQ9ULJ1 636 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 MEFVO15553 781 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ASAP2O43150 1006 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 BCRP11274 1271 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 RXRBP28702 533 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 MAGEA1P43355 309 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 CCNG1P51959 295 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ASIC1P78348 528 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ACTN3Q08043 901 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 C2orf54Q08AI8 447 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 BYSLQ13895 437 aaKnown RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 FAM26FQ5R3K3 315 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 CFAP58Q5T655 872 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 DUPD1Q68J44 220 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 KCNK18Q7Z418 384 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 TXNRD3Q86VQ6 643 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 LMO3Q8TAP4 145 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 LMBR1Q8WVP7 490 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 CEP95Q96GE4 821 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 CCNT1O60563 726 aaKnown RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 GLI1P08151 1106 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 FERP16591 822 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 MTIF2P46199 727 aaKnown RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 NAPAP54920 295 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 XRCC4Q13426 336 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 MCM6Q14566 821 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ZC3H12AQ5D1E8 599 aaKnown RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 SLC27A3Q5K4L6 730 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 KRT79Q5XKE5 535 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 MICALCLQ6ZW33 695 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ZNF444Q8N0Y2 327 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ZBTB9Q96C00 473 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 ANKRD27Q96NW4 1050 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 DHX36Q9H2U1 1008 aaKnown RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 MAP3K20Q9NYL2 800 aaKnown RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 TBC1D7Q9P0N9 293 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 NAGPAQ9UK23 515 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 RALGAPA2Q2PPJ7 1873 aa9.63□□□□□ -0.87
CPNE8-201ENST00000331366 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-201ENST00000331366 HSF2BPO75031 334 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 PLEKP08567 350 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 SLC1A4P43007 532 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 PAFAH1B1P43034 410 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 TPRNQ4KMQ1 711 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 DZIP1Q86YF9 867 aaKnown RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 HVCN1Q96D96 273 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 SEC63Q9UGP8 760 aaKnown RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 DUSP10Q9Y6W6 482 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 IGLV3-22A0A075B6J6 115 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 MEIS2O14770 477 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 ZNF185O15231 689 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 MOCS3O95396 460 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 EYA4O95677 639 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 PON1P27169 355 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 MRPL12P52815 198 aaKnown RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 C8orf74Q6P047 294 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 SMCR8Q8TEV9 937 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 SLC5A5Q92911 643 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 ZDHHC15Q96MV8 337 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 SETDB2Q96T68 719 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 LSP1P33241 339 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 BTDP43251 543 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 KNOP1Q1ED39 458 aaKnown RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 TTC31Q49AM3 519 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-201ENST00000331366 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 FOXR1Q6PIV2 292 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 TMC3Q7Z5M5 1100 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 PIGWQ7Z7B1 504 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 HDAC7Q8WUI4 952 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 MLXIPQ9HAP2 919 aa9.62□□□□□ -0.87
CPNE8-201ENST00000331366 CALUO43852 315 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 TFRCP02786 760 aaKnown RBP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 MMP13P45452 471 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 NFRKBQ6P4R8 1299 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 CRELD2Q6UXH1 353 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 RUFY4Q6ZNE9 571 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 SYDE1Q6ZW31 735 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 COL23A1Q86Y22 540 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 C2CD5Q86YS7 1000 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 ANKS4BQ8N8V4 417 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 SLC35C1Q96A29 364 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 HSD17B14Q9BPX1 270 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 STK33Q9BYT3 514 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 PANK4Q9NVE7 773 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 DAGLAQ9Y4D2 1042 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 ERICH4A6NGS2 130 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 AFPP02771 609 aaKnown RBP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
CPNE8-201ENST00000331366 CCDC50Q8IVM0 306 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 CPLX3Q8WVH0 158 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 TATDN2Q93075 761 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 PIGSQ96S52 555 aa9.61□□□□□ -0.87
CPNE8-201ENST00000331366 DDX25Q9UHL0 483 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms