RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 CXCL11O14625 94 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 ERCC3P19447 782 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 GUCY2CP25092 1073 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 NMT1P30419 496 aaKnown RBP18.73■□□□□ 0.59
DDX41-201ENST00000330503 MARSP56192 900 aaKnown RBP18.73■□□□□ 0.59
DDX41-201ENST00000330503 KCNA1Q09470 495 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 UGCGQ16739 394 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 FKBP15Q5T1M5 1219 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 TRIM65Q6PJ69 517 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 TMTC1Q8IUR5 882 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 PROCA1Q8NCQ7 364 aaPredicted RBP18.73■□□□□ 0.59
DDX41-201ENST00000330503 CHST13Q8NET6 341 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 OR8K1Q8NGG5 319 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 NUP58Q9BVL2 599 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 PARVGQ9HBI0 331 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 DBR1Q9UK59 544 aaKnown RBP18.73■□□□□ 0.59
DDX41-201ENST00000330503 PAXBP1Q9Y5B6 917 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 ADGRG1Q9Y653 693 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 SPDYE5A6NIY4 337 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 KIF2AO00139 706 aaPredicted RBP18.73■□□□□ 0.59
DDX41-201ENST00000330503 PDXKO00764 312 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 MAPK7Q13164 816 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 NLRX1Q86UT6 975 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 DAW1Q8N136 415 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 RETREG2Q8NC44 543 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 AGPAT5Q9NUQ2 364 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 SAMM50Q9Y512 469 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 LCTP09848 1927 aa18.73■□□□□ 0.59
DDX41-201ENST00000330503 LOC285556D6RIA3 1793 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 MAFGO15525 162 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 GCNT3O95395 438 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 GNA14O95837 355 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 NF2P35240 595 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 FIGNQ5HY92 759 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 WDR59Q6PJI9 974 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 PADI6Q6TGC4 694 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 TRIM59Q8IWR1 403 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 CHP1Q99653 195 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
DDX41-201ENST00000330503 ODF2LQ9ULJ1 636 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 KCNH4Q9UQ05 1017 aa18.72■□□□□ 0.59
DDX41-201ENST00000330503 KCNA2P16389 499 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 JAK3P52333 1124 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 KRT76Q01546 638 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 MOGSQ13724 837 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 TTLL12Q14166 644 aaPredicted RBP18.71■□□□□ 0.59
DDX41-201ENST00000330503 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 ZC2HC1CQ53FD0 456 aaPredicted RBP18.71■□□□□ 0.59
DDX41-201ENST00000330503 CYP26C1Q6V0L0 522 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 ZNF720Q7Z2F6 126 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 RIOX2Q8IUF8 465 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 SENP7Q9BQF6 1050 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 ASTN1O14525 1302 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 WDR64B1ANS9 1081 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 CETN3O15182 167 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 EIF3DO15371 548 aaKnown RBP eCLIP18.71■□□□□ 0.59
DDX41-201ENST00000330503 TGFB1I1O43294 461 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 HIP1RO75146 1068 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 CNTN2Q02246 1040 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 SYT10Q6XYQ8 523 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 C4orf19Q8IY42 314 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 PCMTD1Q96MG8 357 aaPredicted RBP18.71■□□□□ 0.59
DDX41-201ENST00000330503 IKZF4Q9H2S9 585 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 TYW1Q9NV66 732 aaKnown RBP18.71■□□□□ 0.59
DDX41-201ENST00000330503 SEL1LQ9UBV2 794 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 TELO2Q9Y4R8 837 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 A0A0G2JMZ2 1700 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 LOXHD1Q8IVV2 1947 aa18.71■□□□□ 0.59
DDX41-201ENST00000330503 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 CALUO43852 315 aaPredicted RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 CNMDO75829 334 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 NR2F2P24468 414 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 SFNP31947 248 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 RARRES1P49788 294 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 ETF1P62495 437 aaKnown RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 KCNMA1Q12791 1236 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 FSTL1Q12841 308 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 PPIL2Q13356 520 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 GPR162Q16538 588 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 ZNF746Q6NUN9 644 aaPredicted RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 CCDC155Q8N6L0 562 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 MOV10L1Q9BXT6 1211 aaKnown RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 ASCC2Q9H1I8 757 aaPredicted RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 KIAA1217Q5T5P2 1943 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 ZMYM2Q9UBW7 1377 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 A0A1W2PQJ5 194 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 TMEM150BA6NC51 233 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 SPATA31C2B4DYI2 1134 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 EPHB6O15197 1021 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 TUBB4AP04350 444 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 TRIM21P19474 475 aaKnown RBP18.7■□□□□ 0.58
DDX41-201ENST00000330503 GTF2F1P35269 517 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDX41-201ENST00000330503 PSMC5P62195 406 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 ZBED6P86452 979 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 KIF18AQ8NI77 898 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 STRA6Q9BX79 667 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
DDX41-201ENST00000330503 A0A0U1RQJ8 604 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms