RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OSBPL9Q96SU4 736 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 PSMD1Q99460 953 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 TMEM39BQ9GZU3 492 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 VEZTQ9HBM0 779 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 OLFML3Q9NRN5 406 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 MRPL11Q9Y3B7 192 aaKnown RBP16.01■□□□□ 0.15
TPM3-206ENST00000330188 HYOU1Q9Y4L1 999 aa16.01■□□□□ 0.15
TPM3-206ENST00000330188 CHMP2AO43633 222 aa16■□□□□ 0.15
TPM3-206ENST00000330188 TBC1D12O60347 775 aa16■□□□□ 0.15
TPM3-206ENST00000330188 NR3C1P04150 777 aa16■□□□□ 0.15
TPM3-206ENST00000330188 ACTN1P12814 892 aa16■□□□□ 0.15
TPM3-206ENST00000330188 GAP43P17677 238 aa16■□□□□ 0.15
TPM3-206ENST00000330188 TCP1P17987 556 aaKnown RBP16■□□□□ 0.15
TPM3-206ENST00000330188 MCM3P25205 808 aa16■□□□□ 0.15
TPM3-206ENST00000330188 RXRBP28702 533 aa16■□□□□ 0.15
TPM3-206ENST00000330188 SLC18A3Q16572 532 aa16■□□□□ 0.15
TPM3-206ENST00000330188 IQCEQ6IPM2 695 aa16■□□□□ 0.15
TPM3-206ENST00000330188 NFRKBQ6P4R8 1299 aa16■□□□□ 0.15
TPM3-206ENST00000330188 C1orf186Q6ZWK4 172 aa16■□□□□ 0.15
TPM3-206ENST00000330188 FAM160B2Q86V87 743 aa16■□□□□ 0.15
TPM3-206ENST00000330188 TPH2Q8IWU9 490 aa16■□□□□ 0.15
TPM3-206ENST00000330188 OGFOD1Q8N543 542 aa16■□□□□ 0.15
TPM3-206ENST00000330188 FAM133AQ8N9E0 248 aa16■□□□□ 0.15
TPM3-206ENST00000330188 NOX5Q96PH1 765 aa16■□□□□ 0.15
TPM3-206ENST00000330188 PLCB1Q9NQ66 1216 aa16■□□□□ 0.15
TPM3-206ENST00000330188 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
TPM3-206ENST00000330188 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
TPM3-206ENST00000330188 SLC16A3O15427 465 aaKnown RBP16■□□□□ 0.15
TPM3-206ENST00000330188 BUB1O43683 1085 aa16■□□□□ 0.15
TPM3-206ENST00000330188 SLC9A1P19634 815 aa16■□□□□ 0.15
TPM3-206ENST00000330188 CASP4P49662 377 aa16■□□□□ 0.15
TPM3-206ENST00000330188 PRELPP51888 382 aa16■□□□□ 0.15
TPM3-206ENST00000330188 KCNA1Q09470 495 aa16■□□□□ 0.15
TPM3-206ENST00000330188 KLHL30Q0D2K2 578 aa16■□□□□ 0.15
TPM3-206ENST00000330188 ASIC2Q16515 512 aa16■□□□□ 0.15
TPM3-206ENST00000330188 KLHDC7AQ5VTJ3 777 aa16■□□□□ 0.15
TPM3-206ENST00000330188 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
TPM3-206ENST00000330188 EHMT1Q9H9B1 1298 aa16■□□□□ 0.15
TPM3-206ENST00000330188 A0A087X0T9 212 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 LRRIQ3A6PVS8 624 aaPredicted RBP15.99■□□□□ 0.15
TPM3-206ENST00000330188 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 ZBTB39O15060 712 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 EIF3DO15371 548 aaKnown RBP eCLIP15.99■□□□□ 0.15
TPM3-206ENST00000330188 NCK2O43639 380 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 GAS7O60861 476 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
TPM3-206ENST00000330188 FAM13AO94988 1023 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 FAM228BP0C875 321 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 XRCC5P13010 732 aaKnown RBP15.99■□□□□ 0.15
TPM3-206ENST00000330188 CYP2C19P33261 490 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 CAP2P40123 477 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 ARID5AQ03989 594 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 ITIH3Q06033 890 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 CEP55Q53EZ4 464 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 MIGA2Q7L4E1 593 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 MMGT1Q8N4V1 131 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 CAMKK2Q96RR4 588 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 TLR10Q9BXR5 811 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 GLIS2Q9BZE0 524 aaPredicted RBP15.99■□□□□ 0.15
TPM3-206ENST00000330188 METTL14Q9HCE5 456 aaKnown RBP15.99■□□□□ 0.15
TPM3-206ENST00000330188 FBXO28Q9NVF7 368 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 ZMYM2Q9UBW7 1377 aa15.99■□□□□ 0.15
TPM3-206ENST00000330188 CLIC2O15247 247 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 TGFB1I1O43294 461 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 RPL13P26373 211 aaKnown RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 PON1P27169 355 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 EN1Q05925 392 aaPredicted RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 GPS2Q13227 327 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 EPHA7Q15375 998 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 EXOC3L4Q17RC7 722 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 LDHDQ86WU2 507 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 UNC45AQ9H3U1 944 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 LUC7LQ9NQ29 371 aaKnown RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 FRMPD4Q14CM0 1322 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 LOXHD1Q8IVV2 1947 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 ARP10275 920 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 EPB41P11171 864 aaKnown RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 UCHL3P15374 230 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 MUTP22033 750 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 NAB2Q15742 525 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 MAP9Q49MG5 647 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 DCAF17Q5H9S7 520 aaPredicted RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 IRF2BP2Q7Z5L9 587 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 MTMR14Q8NCE2 650 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.98■□□□□ 0.15
TPM3-206ENST00000330188 WRAP73Q9P2S5 460 aaPredicted RBP15.98■□□□□ 0.15
TPM3-206ENST00000330188 PGAP2Q9UHJ9 254 aa15.98■□□□□ 0.15
TPM3-206ENST00000330188 KLRC1P26715 233 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 NMT1P30419 496 aaKnown RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 CXCR5P32302 372 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 SETQ01105 290 aaPredicted RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 ENOX2Q16206 610 aaKnown RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 B3GNT9Q6UX72 402 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 FAM83AQ86UY5 434 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 MYCT1Q8N699 235 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms