RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 CHST13Q8NET6 341 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 EHD4Q9H223 541 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 LGALS16A8MUM7 142 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 MAPK4P31152 587 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 CACNB3P54284 484 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 DNAJC24Q6P3W2 148 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 CDKL2Q92772 493 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 PARK7Q99497 189 aaKnown RBP12.36□□□□□ -0.43
COL4A5-201ENST00000328300 BCL9O00512 1426 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 ADCY8P40145 1251 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 UAP1Q16222 522 aaPredicted RBP12.36□□□□□ -0.43
COL4A5-201ENST00000328300 LDHDQ86WU2 507 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 AIFM3Q96NN9 605 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 MED4Q9NPJ6 270 aa12.36□□□□□ -0.43
COL4A5-201ENST00000328300 MEIS1O00470 390 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 GSDMBQ8TAX9 411 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 IGDCC4Q8TDY8 1250 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■■■■ 39.6
COL4A5-201ENST00000328300 CNOT7Q9UIV1 285 aaKnown RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 SMIM23A6NLE4 172 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 MIF4GDA9UHW6 222 aaKnown RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 CIB2O75838 187 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 FKBP1AP62942 108 aaKnown RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 KRT12Q99456 494 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 LRRC41Q15345 812 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 ZNF280CQ8ND82 737 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 KCNB2Q92953 911 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 PPP1R13BQ96KQ4 1090 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 VPS37BQ9H9H4 285 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 CEP55Q53EZ4 464 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 SCYL2Q6P3W7 929 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 DDX41Q9UJV9 622 aaKnown RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 NR3C1P04150 777 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 MUTP22033 750 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 TFAMQ00059 246 aaKnown RBP12.35□□□□□ -0.43
COL4A5-201ENST00000328300 ZNF667Q5HYK9 610 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
COL4A5-201ENST00000328300 COASYQ13057 564 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 KNOP1Q1ED39 458 aaKnown RBP12.34□□□□□ -0.43
COL4A5-201ENST00000328300 BCAP29Q9UHQ4 241 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 A0A1W2PQC6 194 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
COL4A5-201ENST00000328300 ARL4AP40617 200 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 KRT31Q15323 416 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 ELF2Q15723 593 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 MYBL1P10243 752 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 TRIM72Q6ZMU5 477 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 UBE2TQ9NPD8 197 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-201ENST00000328300 PFDN4Q9NQP4 134 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 F8W8V4 182 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 MFAP3LO75121 409 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 KRT15P19012 456 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 CIITAP33076 1130 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 GABPAQ06546 454 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 RGS16O15492 202 aaPredicted RBP12.34□□□□□ -0.43
COL4A5-201ENST00000328300 TBC1D8O95759 1140 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 VPS52Q8N1B4 723 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 THEM5Q8N1Q8 247 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 BEST2Q8NFU1 509 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 KATNAL1Q9BW62 490 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
COL4A5-201ENST00000328300 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
COL4A5-201ENST00000328300 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
COL4A5-201ENST00000328300 CALB1P05937 261 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 NFKBIAP25963 317 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 CHRNA5P30532 468 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 ARHGAP25P42331 645 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 RASSF7Q02833 373 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 MOXD1Q6UVY6 613 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 DYDC2Q96IM9 177 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 LRRC4Q9HBW1 653 aa12.33□□□□□ -0.43
COL4A5-201ENST00000328300 C3P01024 1663 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 PDXKO00764 312 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 CLDN3O15551 220 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 RFC5P40937 340 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 PEX3P56589 373 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 SFR1Q86XK3 245 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 NHEJ1Q9H9Q4 299 aaPredicted RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 STXBP3O00186 592 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 CLIC2O15247 247 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 RASA1P20936 1047 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 KRT71Q3SY84 523 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms