RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 ARHGAP36Q6ZRI8 547 aa5.07□□□□□ -1.6
CBX3P1-201ENST00000325243 NEU4Q8WWR8 484 aaPredicted RBP5.07□□□□□ -1.6
CBX3P1-201ENST00000325243 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
CBX3P1-201ENST00000325243 ALG1Q9BT22 464 aa5.07□□□□□ -1.6
CBX3P1-201ENST00000325243 C12orf65Q9H3J6 166 aaKnown RBP5.07□□□□□ -1.6
CBX3P1-201ENST00000325243 RIC8BQ9NVN3 520 aa5.07□□□□□ -1.6
CBX3P1-201ENST00000325243 IQCA1LA6NCM1 817 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 MAN2B1O00754 1011 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 U2SURPO15042 1029 aaKnown RBP5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 HMGCRP04035 888 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 MC4RP32245 332 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 MSX2P35548 267 aaPredicted RBP5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 ANKS3Q6ZW76 656 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 TINF2Q9BSI4 451 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 INCENPQ9NQS7 918 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 CDC42EP3Q9UKI2 254 aa5.06□□□□□ -1.6
CBX3P1-201ENST00000325243 TRAV20A0A0B4J274 112 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 WNT9AO14904 365 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 KLF4O43474 513 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 AMY2AP04746 511 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 PDE6AP16499 860 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 AMY2BP19961 511 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 PTGS1P23219 599 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 RPS19P39019 145 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 PURAQ00577 322 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 ARID5AQ03989 594 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 GNL2Q13823 731 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 EIF4HQ15056 248 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 GPR19Q15760 415 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 PTRH1Q86Y79 214 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 LDLRAD3Q86YD5 345 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 GPR135Q8IZ08 494 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 NLGN4XQ8N0W4 816 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 TLR9Q9NR96 1032 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 GALNT8Q9NY28 637 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 PLA2G3Q9NZ20 509 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 BTBD7Q9P203 1132 aa5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 PUF60Q9UHX1 559 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 R3HCC1Q9Y3T6 440 aaKnown RBP5.05□□□□□ -1.6
CBX3P1-201ENST00000325243 A0A087X1B8 175 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 MPIG6BO95866 241 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 AOAHP28039 575 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 HIBADHP31937 336 aaKnown RBP5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 INHBCP55103 352 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 PAK1Q13153 545 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 TUBA3CQ13748 450 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 STILQ15468 1287 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 FIGNQ5HY92 759 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 TUBA3EQ6PEY2 450 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 USP30Q70CQ3 517 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 OSTM1Q86WC4 334 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 ZNF575Q86XF7 245 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 ST13P5Q8NFI4 369 aaPredicted RBP5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 WNK4Q96J92 1243 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 MMRN2Q9H8L6 949 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 FBXO10Q9UK96 956 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 ATP23Q9Y6H3 246 aa5.04□□□□□ -1.6
CBX3P1-201ENST00000325243 C4BPAP04003 597 aaKnown RBP5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 JAM2P57087 298 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 PCOLCEQ15113 449 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 TRIM68Q6AZZ1 485 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 LRSAM1Q6UWE0 723 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 CXXC5Q7LFL8 322 aaKnown RBP5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 FILIP1Q7Z7B0 1213 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 PCDH19Q8TAB3 1148 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 AMNQ9BXJ7 453 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 CEP72Q9P209 647 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 CBLCQ9ULV8 474 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 PCDHA8Q9Y5H6 950 aa5.03□□□□□ -1.6
CBX3P1-201ENST00000325243 PRAMEF25A6NGN4 478 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 KCNK3O14649 394 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 PYGMP11217 842 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 KRT15P19012 456 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 DNAJA1P31689 397 aaKnown RBP5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 GJA4P35212 333 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 MRE11P49959 708 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 NANOS3P60323 173 aaKnown RBP5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 CD83Q01151 205 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 HGFACQ04756 655 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 SEC23AQ15436 765 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 KANK2Q63ZY3 851 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 ZNF627Q7L945 461 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 OTOP2Q7RTS6 562 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 LRRC47Q8N1G4 583 aaKnown RBP5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 OR14K1Q8NGZ2 314 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 ZNF483Q8TF39 744 aaPredicted RBP5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 FBXW5Q969U6 566 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 OR10A2Q9H208 303 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 ZNF703Q9H7S9 590 aaPredicted RBP5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 AGO3Q9H9G7 860 aaKnown RBP5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 MSL2Q9HCI7 577 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 CATSPERZQ9NTU4 200 aa5.02□□□□□ -1.61
CBX3P1-201ENST00000325243 ZNF561-AS1K7EIQ3 104 aa5.01□□□□□ -1.61
CBX3P1-201ENST00000325243 ADH4P08319 380 aa5.01□□□□□ -1.61
CBX3P1-201ENST00000325243 GRM7Q14831 915 aa5.01□□□□□ -1.61
CBX3P1-201ENST00000325243 SPTY2D1Q68D10 685 aaPredicted RBP5.01□□□□□ -1.61
CBX3P1-201ENST00000325243 TMEM200BQ69YZ2 307 aa5.01□□□□□ -1.61
CBX3P1-201ENST00000325243 PCSK4Q6UW60 755 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms