RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SOCS7O14512 581 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 ZNF862O60290 1169 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 TBCAO75347 108 aaKnown RBP20.39■□□□□ 0.86
USP39-201ENST00000323701 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.86
USP39-201ENST00000323701 NMT1P30419 496 aaKnown RBP20.39■□□□□ 0.86
USP39-201ENST00000323701 YWHABP31946 246 aaKnown RBP20.39■□□□□ 0.86
USP39-201ENST00000323701 LRRC63Q05C16 580 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 MIIPQ5JXC2 388 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 PLA2G4FQ68DD2 849 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 PADI6Q6TGC4 694 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 ZNF507Q8TCN5 953 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 PTPN18Q99952 460 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 CENPFP49454 3210 aa20.39■□□□□ 0.86
USP39-201ENST00000323701 ARHGEF35A5YM69 484 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 B4DLN1 442 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 SLC25A27O95847 323 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 JAK3P52333 1124 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 NPEPPSP55786 919 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 FILIP1LQ4L180 1135 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 ZC2HC1CQ53FD0 456 aaPredicted RBP20.39■□□□□ 0.85
USP39-201ENST00000323701 WDR78Q5VTH9 848 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 ZNF746Q6NUN9 644 aaPredicted RBP20.39■□□□□ 0.85
USP39-201ENST00000323701 KSR1Q8IVT5 923 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 CCDC150Q8NCX0 1101 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 NOC3LQ8WTT2 800 aaKnown RBP20.39■□□□□ 0.85
USP39-201ENST00000323701 MRPL44Q9H9J2 332 aaKnown RBP20.39■□□□□ 0.85
USP39-201ENST00000323701 JPH1Q9HDC5 661 aaPredicted RBP20.39■□□□□ 0.85
USP39-201ENST00000323701 PCDHA10Q9Y5I2 948 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 COL4A3BPQ9Y5P4 624 aa20.39■□□□□ 0.85
USP39-201ENST00000323701 UNCXA6NJT0 531 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 BACH1O14867 736 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 STAM2O75886 525 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 LYPLA2O95372 231 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 UBXN1Q04323 297 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 RBL2Q08999 1139 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 ANO5Q75V66 913 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 CYFIP1Q7L576 1253 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 TMEM139Q8IV31 216 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 MYCT1Q8N699 235 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 C2orf69Q8N8R5 385 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 CPLX3Q8WVH0 158 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 SENP7Q9BQF6 1050 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 SLC9A2Q9UBY0 812 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 DNAJC25-GNG10A0A024R161 153 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 USP27XA6NNY8 438 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 LGALS16A8MUM7 142 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 HIP1RO75146 1068 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 FAM13AO94988 1023 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 CETPP11597 493 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 SFNP31947 248 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 ZNF131P52739 623 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 ACTR2P61160 394 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 PSMC5P62195 406 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 FKBP1BP68106 108 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 GNPTABQ3T906 1256 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 SPRYD7Q5W111 196 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 CCDC60Q8IWA6 550 aaPredicted RBP20.38■□□□□ 0.85
USP39-201ENST00000323701 C4orf19Q8IY42 314 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 ANKRD13CQ8N6S4 541 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 SPTLC3Q9NUV7 552 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 MAGEC2Q9UBF1 373 aaPredicted RBP20.38■□□□□ 0.85
USP39-201ENST00000323701 GABBR1Q9UBS5 961 aa20.38■□□□□ 0.85
USP39-201ENST00000323701 STBD1O95210 358 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 GYPCP04921 128 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 ICAM3P32942 547 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 GTF2A2P52657 109 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 SWSAP1Q6NVH7 229 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 ANKRD20A12PQ8NF67 263 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 SMCR8Q8TEV9 937 aaPredicted RBP20.37■□□□□ 0.85
USP39-201ENST00000323701 TMX1Q9H3N1 280 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 PARVGQ9HBI0 331 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 OLFML3Q9NRN5 406 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 DBR1Q9UK59 544 aaKnown RBP20.37■□□□□ 0.85
USP39-201ENST00000323701 NFASCO94856 1347 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 LRRC37A2A6NM11 1700 aa20.37■□□□□ 0.85
USP39-201ENST00000323701 PES1O00541 588 aaKnown RBP20.36■□□□□ 0.85
USP39-201ENST00000323701 OFD1O75665 1012 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 GCNT3O95395 438 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 GUCY2CP25092 1073 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 FXR1P51114 621 aaKnown RBP eCLIP20.36■□□□□ 0.85
USP39-201ENST00000323701 ABHD15Q6UXT9 468 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 CDHR1Q96JP9 859 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 MMP19Q99542 508 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 TCEAL9Q9UHQ7 104 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 MCM3APO60318 1980 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 ZNFX1Q9P2E3 1918 aaKnown RBP20.36■□□□□ 0.85
USP39-201ENST00000323701 USO1O60763 962 aaKnown RBP20.36■□□□□ 0.85
USP39-201ENST00000323701 UBA1P22314 1058 aaKnown RBP20.36■□□□□ 0.85
USP39-201ENST00000323701 MTIF2P46199 727 aaKnown RBP20.36■□□□□ 0.85
USP39-201ENST00000323701 KLK7P49862 253 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 GLIPR1L2Q4G1C9 344 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
USP39-201ENST00000323701 GPRC5CQ9NQ84 441 aa20.36■□□□□ 0.85
USP39-201ENST00000323701 CASP14P31944 242 aa20.35■□□□□ 0.85
USP39-201ENST00000323701 KNOP1Q1ED39 458 aaKnown RBP20.35■□□□□ 0.85
USP39-201ENST00000323701 TMEM63BQ5T3F8 832 aa20.35■□□□□ 0.85
USP39-201ENST00000323701 KCND2Q9NZV8 630 aa20.35■□□□□ 0.85
USP39-201ENST00000323701 ZMYM2Q9UBW7 1377 aa20.35■□□□□ 0.85
USP39-201ENST00000323701 MYH11P35749 1972 aa20.35■□□□□ 0.85
USP39-201ENST00000323701 ARIH2O95376 493 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms