RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
NCL-201ENST00000322723 EPC1Q9H2F5 836 aa13.21□□□□□ -0.29
NCL-201ENST00000322723 KRT86O43790 486 aa13.21□□□□□ -0.3
NCL-201ENST00000322723 EPHA7Q15375 998 aa13.21□□□□□ -0.3
NCL-201ENST00000322723 POTEAQ6S8J7 498 aa13.21□□□□□ -0.3
NCL-201ENST00000322723 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.3
NCL-201ENST00000322723 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.3
NCL-201ENST00000322723 WRAP73Q9P2S5 460 aaPredicted RBP13.21□□□□□ -0.3
NCL-201ENST00000322723 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.3
NCL-201ENST00000322723 DNM3Q9UQ16 869 aa13.21□□□□□ -0.3
NCL-201ENST00000322723 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 LYPLA2O95372 231 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 ICAM1P05362 532 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 DAAM1Q9Y4D1 1078 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 SBF1O95248 1867 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 DPEP1P16444 411 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 PRELPP51888 382 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 MAPK7Q13164 816 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 SFR1Q86XK3 245 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 RNF10Q8N5U6 811 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 NEK9Q8TD19 979 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 RIT2Q99578 217 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 L1RE1Q9UN81 338 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 ERLIN1O75477 346 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 SERPING1P05155 500 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 USH1GQ495M9 461 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 CCDC122Q5T0U0 273 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 CREG2Q8IUH2 290 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 MAF1Q9H063 256 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 SALL4Q9UJQ4 1053 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
NCL-201ENST00000322723 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
NCL-201ENST00000322723 TCP10L2B9ZVM9 353 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
NCL-201ENST00000322723 USP14P54578 494 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 UBIAD1Q9Y5Z9 338 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
NCL-201ENST00000322723 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
NCL-201ENST00000322723 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 MYBP10242 640 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 IDEP14735 1019 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
NCL-201ENST00000322723 MYBPC2Q14324 1141 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 NOA1Q8NC60 698 aaKnown RBP13.19□□□□□ -0.3
NCL-201ENST00000322723 EEF2KMTQ96G04 330 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 TGFB2P61812 414 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 NCAPH2Q6IBW4 605 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 MMGT1Q8N4V1 131 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 KCNN1Q92952 543 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 CAPN6Q9Y6Q1 641 aa13.19□□□□□ -0.3
NCL-201ENST00000322723 WNT10BO00744 389 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 HERC4Q5GLZ8 1057 aaPredicted RBP13.18□□□□□ -0.3
NCL-201ENST00000322723 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 ZNF112Q9UJU3 913 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 SAR1BQ9Y6B6 198 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 MXRA8Q9BRK3 442 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
NCL-201ENST00000322723 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 PFASO15067 1338 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 SSC5DA1L4H1 1573 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
NCL-201ENST00000322723 KIAA0754O94854 1291 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 C12orf56Q8IXR9 622 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 LPAR1Q92633 364 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 ST6GALNAC4Q9H4F1 302 aa13.18□□□□□ -0.3
NCL-201ENST00000322723 ZNF277Q9NRM2 450 aaPredicted RBP13.18□□□□□ -0.3
NCL-201ENST00000322723 TRAF5O00463 557 aa13.17□□□□□ -0.3
NCL-201ENST00000322723 CES2O00748 559 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms