RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 BMS1Q14692 1282 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 MTF1Q14872 753 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 NAALADL2Q58DX5 795 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 SH3BP5LQ7L8J4 393 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 KSR1Q8IVT5 923 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PANX2Q96RD6 677 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 MMP19Q99542 508 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 CCDC113Q9H0I3 377 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 JPH1Q9HDC5 661 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 SLC9A2Q9UBY0 812 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 MKRN1Q9UHC7 482 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 ADAMTS1Q9UHI8 967 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 DENND3A2RUS2 1198 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 SFNP31947 248 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 IFFO1Q0D2I5 559 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PEX26Q7Z412 305 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 APOL6Q9BWW8 343 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 NHEJ1Q9H9Q4 299 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 SAR1BQ9Y6B6 198 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 COL16A1Q07092 1604 aaPredicted RBP10.15□□□□□ -0.79
TMEM39A-201ENST00000319172 KLRG2A4D1S0 409 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 H2AFZP0C0S5 128 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TMEM191BP0C7N4 346 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TRIM49P0CI25 452 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TRIM49CP0CI26 452 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 GCLMP48507 274 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 PLCB3Q01970 1234 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 H2AFVQ71UI9 128 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 FASTKD5Q7L8L6 764 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 NEK9Q8TD19 979 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 ZNF302Q9NR11 478 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 ABHD10Q9NUJ1 306 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 N4BP1O75113 896 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 EPHX2P34913 555 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 FKBP1CQ5VVH2 108 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 FAM49AQ9H0Q0 323 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 VPS33BQ9H267 617 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TUFT1Q9NNX1 390 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 MYBP10242 640 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 RPS6KA1Q15418 735 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 MAP1SQ66K74 1059 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TRPM4Q8TD43 1214 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 IPO4Q8TEX9 1081 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 MKL1Q969V6 931 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 SAAL1Q96ER3 474 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 ATP6V0A4Q9HBG4 840 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 SPC25Q9HBM1 224 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 UBE2TQ9NPD8 197 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TYW1Q9NV66 732 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 KBTBD4Q9NVX7 518 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 RSPH10B2B2RC85 870 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 GGPS1O95749 300 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 RSPH10BP0C881 870 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 TFAMQ00059 246 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 HAUS6Q7Z4H7 955 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 MAATS1Q7Z4T9 603 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 KLHL7Q8IXQ5 586 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 MCPH1Q8NEM0 835 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 NT5C1BQ96P26 610 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 ZMYND15Q9H091 742 aa10.14□□□□□ -0.79
TMEM39A-201ENST00000319172 ASTN2O75129 1339 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 GRIN3BO60391 1043 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 MYCP01106 439 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 PIK3CAP42336 1068 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 NEDD9Q14511 834 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 GPC2Q8N158 579 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 TRIM58Q8NG06 486 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 ADPGKQ9BRR6 497 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 KIAA1683Q9H0B3 1180 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 LRRC53A6NM62 1247 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 CYP11B2P19099 503 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 FXR1P51114 621 aaKnown RBP eCLIP10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 XXYLT1Q8NBI6 393 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 CEP63Q96MT8 703 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 DNAJC18Q9H819 358 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 GPRC5DQ9NZD1 345 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 KIF11P52732 1056 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 PSMC6P62333 389 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 TATDN1Q6P1N9 297 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 GDAP1L1Q96MZ0 367 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 SPATA33Q96N06 139 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 TRIM31Q9BZY9 425 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 UNC45AQ9H3U1 944 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 ST7Q9NRC1 585 aa10.13□□□□□ -0.79
TMEM39A-201ENST00000319172 MAP2K1Q02750 393 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 EHHADHQ08426 723 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TFDP1Q14186 410 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TKFCQ3LXA3 575 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms