RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PPP2R5BQ15173 497 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 USH1GQ495M9 461 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 ANKRD20A8PQ5CZ79 823 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 SWT1Q5T5J6 900 aaKnown RBP15.47■□□□□ 0.07
PABPC1-201ENST00000318607 TTBK2Q6IQ55 1244 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 MAD2L2Q9UI95 211 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 MYO5AQ9Y4I1 1855 aaKnown RBP15.47■□□□□ 0.07
PABPC1-201ENST00000318607 MRC1P22897 1456 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 A0A1B0GUA9 196 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 ATMINO43313 823 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-201ENST00000318607 PDHA1P08559 390 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 SMTNP53814 917 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 KCNJ2P63252 427 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 UBXN2AP68543 259 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 SKOR1P84550 965 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 SPICE1Q8N0Z3 855 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 WHAMMQ8TF30 809 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 SGSM3Q96HU1 749 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 NOD2Q9HC29 1040 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 BLOC1S4Q9NUP1 217 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 ABCF3Q9NUQ8 709 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 KDM3BQ7LBC6 1761 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 GNA11P29992 359 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 CASP4P49662 377 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 SLC29A2Q14542 456 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 FAM182AQ5T1J6 154 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 RSRC1Q96IZ7 334 aaKnown RBP15.47■□□□□ 0.07
PABPC1-201ENST00000318607 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 CETN3O15182 167 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 FSBPO95073 299 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 GCNT3O95395 438 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
PABPC1-201ENST00000318607 SLC18A3Q16572 532 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 NUGGCQ68CJ6 796 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 HGSNATQ68CP4 663 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 DENND2CQ68D51 928 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 PLA2G12BQ9BX93 195 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 BARHL2Q9NY43 387 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 MYH15Q9Y2K3 1946 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 GSTTP1A0A1W2PQM5 241 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 NAB2Q15742 525 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 LONRF1Q17RB8 773 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 EXOC3L4Q17RC7 722 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 CAVIN3Q969G5 261 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 GDF3Q9NR23 364 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 FGFR1OP2Q9NVK5 253 aa15.46■□□□□ 0.07
PABPC1-201ENST00000318607 H2AFZP0C0S5 128 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CREB1P16220 341 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CASP5P51878 434 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 MESDQ14696 234 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CENPPQ6IPU0 288 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 H2AFVQ71UI9 128 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CEP95Q96GE4 821 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 ACP6Q9NPH0 428 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 ARMCX3Q9UH62 379 aaPredicted RBP15.45■□□□□ 0.06
PABPC1-201ENST00000318607 HDAC9Q9UKV0 1011 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 TRIM37O94972 964 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 SEMA3FQ13275 785 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 UNC13DQ70J99 1090 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 FAM228AQ86W67 206 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CCDC105Q8IYK2 499 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 MSL3Q8N5Y2 521 aaKnown RBP15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CCDC26Q8TAB7 109 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 FBXO25Q8TCJ0 367 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 PNMA5Q96PV4 448 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 PURBQ96QR8 312 aaKnown RBP15.45■□□□□ 0.06
PABPC1-201ENST00000318607 PPP1R12CQ9BZL4 782 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 SEMA4AQ9H3S1 761 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 KIF9Q9HAQ2 790 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 DONSONQ9NYP3 566 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 SRP68Q9UHB9 627 aaKnown RBP15.45■□□□□ 0.06
PABPC1-201ENST00000318607 GLI3P10071 1580 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 RSPH10B2B2RC85 870 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 PIAS1O75925 651 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 RSPH10BP0C881 870 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 TRIM49P0CI25 452 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 TRIM49CP0CI26 452 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 KRT25Q7Z3Z0 450 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 PIGOQ8TEQ8 1089 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 KLHL29Q96CT2 875 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CHMP6Q96FZ7 201 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 BTBD6Q96KE9 485 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 POP1Q99575 1024 aaKnown RBP15.45■□□□□ 0.06
PABPC1-201ENST00000318607 RAB34Q9BZG1 259 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 TRIM6Q9C030 488 aaPredicted RBP15.45■□□□□ 0.06
PABPC1-201ENST00000318607 CTTNBP2NLQ9P2B4 639 aa15.45■□□□□ 0.06
PABPC1-201ENST00000318607 C5P01031 1676 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 BIRC2Q13490 618 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 PRR16Q569H4 304 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
PABPC1-201ENST00000318607 MIEF2Q96C03 454 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 PWWP2AQ96N64 755 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 INPP4AQ96PE3 977 aaPredicted RBP15.44■□□□□ 0.06
PABPC1-201ENST00000318607 MEI1Q5TIA1 1274 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 ZNF449Q6P9G9 518 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 RFX8Q6ZV50 586 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 BRINP3Q76B58 766 aa15.44■□□□□ 0.06
PABPC1-201ENST00000318607 C18orf8Q96DM3 657 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms