RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 EEF2KMTQ96G04 330 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 PLS3P13797 630 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 SLCO1A2P46721 670 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 MKRN3Q13064 507 aaKnown RBP20.41■□□□□ 0.86
UBE2N-201ENST00000318066 N4BP2L2Q92802 583 aaPredicted RBP20.41■□□□□ 0.86
UBE2N-201ENST00000318066 MRPL46Q9H2W6 279 aaKnown RBP20.41■□□□□ 0.86
UBE2N-201ENST00000318066 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 SAMD9Q5K651 1589 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 CTIFO43310 598 aaKnown RBP20.41■□□□□ 0.86
UBE2N-201ENST00000318066 NCAPG2Q86XI2 1143 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 ARHGAP18Q8N392 663 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 TRIML2Q8N7C3 387 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 DEPDC1BQ8WUY9 529 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 PI4KBQ9UBF8 816 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 CDK12Q9NYV4 1490 aaPredicted RBP20.41■□□□□ 0.86
UBE2N-201ENST00000318066 YEATS2Q9ULM3 1422 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 TCP10L2B9ZVM9 353 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 TADA3O75528 432 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 PAMP19021 973 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 FAM47CQ5HY64 1035 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 COPEO14579 308 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 GGPS1O95749 300 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 SCNN1DP51172 638 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 TAB3Q8N5C8 712 aaPredicted RBP20.4■□□□□ 0.86
UBE2N-201ENST00000318066 SLITRK6Q9H5Y7 841 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 STRIP2Q9ULQ0 834 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 ZRANB2O95218 330 aaKnown RBP eCLIP20.4■□□□□ 0.86
UBE2N-201ENST00000318066 HSPA2P54652 639 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 NDE1Q9NXR1 346 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 TARSL2A2RTX5 802 aaKnown RBP20.4■□□□□ 0.86
UBE2N-201ENST00000318066 XPAP23025 273 aaPredicted RBP20.4■□□□□ 0.86
UBE2N-201ENST00000318066 OR6B2Q6IFH4 312 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 LCORLQ8N3X6 602 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 TSC22D3Q99576 134 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 ATP1A3P13637 1013 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 EEF1DP29692 281 aaKnown RBP20.4■□□□□ 0.86
UBE2N-201ENST00000318066 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 ERICH1Q86X53 443 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 FBXL13Q8NEE6 735 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 ZNF408Q9H9D4 720 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 SUN2Q9UH99 717 aa20.4■□□□□ 0.86
UBE2N-201ENST00000318066 APOBEC2Q9Y235 224 aaKnown RBP20.4■□□□□ 0.86
UBE2N-201ENST00000318066 PFASO15067 1338 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 CHRNA3P32297 505 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 JAK3P52333 1124 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 GPC5P78333 572 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 TTC39CQ8N584 583 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 RNF169Q8NCN4 708 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 TMEM35BQ8NCS4 154 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 SCG3Q8WXD2 468 aaKnown RBP20.39■□□□□ 0.86
UBE2N-201ENST00000318066 PDLIM2Q96JY6 352 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 PUS7LQ9H0K6 701 aaKnown RBP20.39■□□□□ 0.86
UBE2N-201ENST00000318066 TBK1Q9UHD2 729 aa20.39■□□□□ 0.86
UBE2N-201ENST00000318066 GYG2O15488 501 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 ABL1P00519 1130 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 TFAMQ00059 246 aaKnown RBP20.39■□□□□ 0.85
UBE2N-201ENST00000318066 DRP2Q13474 957 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 SKA2Q8WVK7 121 aaPredicted RBP20.39■□□□□ 0.85
UBE2N-201ENST00000318066 HINFPQ9BQA5 517 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 A0A1W2PQC6 194 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 CALB1P05937 261 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 CHAMP1Q96JM3 812 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 PGBD1Q96JS3 809 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 ZBTB18Q99592 522 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 ELAC2Q9BQ52 826 aaKnown RBP20.39■□□□□ 0.85
UBE2N-201ENST00000318066 SEL1LQ9UBV2 794 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 TRIM33Q9UPN9 1127 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 GMNCA6NCL1 334 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 HNRNPCL1O60812 293 aaKnown RBP20.39■□□□□ 0.85
UBE2N-201ENST00000318066 PAPOLAP51003 745 aaKnown RBP20.39■□□□□ 0.85
UBE2N-201ENST00000318066 DYNC1I2Q13409 638 aaKnown RBP20.39■□□□□ 0.85
UBE2N-201ENST00000318066 TMTC4Q5T4D3 741 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 SIX6OS1Q8N1H7 587 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 FGD4Q96M96 766 aa20.39■□□□□ 0.85
UBE2N-201ENST00000318066 TBC1D1Q86TI0 1168 aaPredicted RBP20.38■□□□□ 0.85
UBE2N-201ENST00000318066 MCPH1Q8NEM0 835 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 FTOQ9C0B1 505 aaKnown RBP eCLIP20.38■□□□□ 0.85
UBE2N-201ENST00000318066 CYP26B1Q9NR63 512 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 POLE2P56282 527 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 KIF22Q14807 665 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.38■□□□□ 0.85
UBE2N-201ENST00000318066 CCDC24Q8N4L8 307 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 NCF2P19878 526 aaPredicted RBP20.38■□□□□ 0.85
UBE2N-201ENST00000318066 DDIT3P35638 169 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 CASP2P42575 452 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 HSPA4LO95757 839 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 EEF1B2P24534 225 aaKnown RBP20.38■□□□□ 0.85
UBE2N-201ENST00000318066 ANXA13P27216 316 aa20.38■□□□□ 0.85
UBE2N-201ENST00000318066 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
UBE2N-201ENST00000318066 MAGI3Q5TCQ9 1506 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 NVLO15381 856 aaKnown RBP20.37■□□□□ 0.85
UBE2N-201ENST00000318066 PPP2R2AP63151 447 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 GRAMD1BQ3KR37 738 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 DCAF4Q8WV16 495 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 AP1M1Q9BXS5 423 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 TRPA1O75762 1119 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 PODNQ7Z5L7 613 aa20.37■□□□□ 0.85
UBE2N-201ENST00000318066 SESTD1Q86VW0 696 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms