RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SLITRK6Q9H5Y7 841 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 SUCLA2Q9P2R7 463 aaPredicted RBP20.88■□□□□ 0.93
RTN4-201ENST00000317610 INTUQ9ULD6 942 aa20.88■□□□□ 0.93
RTN4-201ENST00000317610 FLOT1O75955 427 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 GPSM2P81274 684 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 MTMR3Q13615 1198 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 EPM2AIP1Q7L775 607 aaPredicted RBP20.87■□□□□ 0.93
RTN4-201ENST00000317610 GOLPH3Q9H4A6 298 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 VCPKMTQ9H867 229 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 PSTPIP2Q9H939 334 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 ARMCX3Q9UH62 379 aaPredicted RBP20.87■□□□□ 0.93
RTN4-201ENST00000317610 E7EVH7 732 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 MYO1FO00160 1098 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 ZBTB5O15062 677 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 TTLL1O95922 423 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 CTNNA1P35221 906 aaKnown RBP20.87■□□□□ 0.93
RTN4-201ENST00000317610 NPEPPSP55786 919 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 JAM2P57087 298 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 ACTN3Q08043 901 aaPredicted RBP20.87■□□□□ 0.93
RTN4-201ENST00000317610 DDR1Q08345 913 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 EXOC3L4Q17RC7 722 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 CYFIP2Q96F07 1278 aa20.87■□□□□ 0.93
RTN4-201ENST00000317610 GEMIN8Q9NWZ8 242 aaKnown RBP20.87■□□□□ 0.93
RTN4-201ENST00000317610 CYP3A7-CYP3A51PA0A087WV96 503 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 GNPATO15228 680 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 MED24O75448 989 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 PAEPP09466 180 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 CYP3A7P24462 503 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 CASP5P51878 434 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 EPHA7Q15375 998 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 DPP8Q6V1X1 898 aaPredicted RBP20.86■□□□□ 0.93
RTN4-201ENST00000317610 DDX42Q86XP3 938 aaKnown RBP eCLIP20.86■□□□□ 0.939e-7■■□□□ 12.1
RTN4-201ENST00000317610 LMBR1Q8WVP7 490 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 AP1M1Q9BXS5 423 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 GREB1LQ9C091 1923 aaPredicted RBP20.86■□□□□ 0.93
RTN4-201ENST00000317610 HPDP32754 393 aaPredicted RBP20.86■□□□□ 0.93
RTN4-201ENST00000317610 HOXD13P35453 343 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 KNOP1Q1ED39 458 aaKnown RBP20.86■□□□□ 0.93
RTN4-201ENST00000317610 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
RTN4-201ENST00000317610 TTBK2Q6IQ55 1244 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 OR2W6PQ8NHA6 318 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 MXD3Q9BW11 206 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 DDX47Q9H0S4 455 aaKnown RBP20.86■□□□□ 0.93
RTN4-201ENST00000317610 SIX2Q9NPC8 291 aa20.86■□□□□ 0.93
RTN4-201ENST00000317610 GMNCA6NCL1 334 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 TRAPPC3O43617 180 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 ATP2B4P23634 1241 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 IRX3P78415 501 aaPredicted RBP20.85■□□□□ 0.93
RTN4-201ENST00000317610 GIT2Q14161 759 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 MFSD14BQ5SR56 506 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 NCAPGQ9BPX3 1015 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 GLT8D2Q9H1C3 349 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 A1CFQ9NQ94 594 aaKnown RBP20.85■□□□□ 0.93
RTN4-201ENST00000317610 MYO3BQ8WXR4 1341 aa20.85■□□□□ 0.93
RTN4-201ENST00000317610 H0YHG0 523 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 KRIT1O00522 736 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 PDXKO00764 312 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 KRT18P05783 430 aaKnown RBP20.84■□□□□ 0.93
RTN4-201ENST00000317610 MNAT1P51948 309 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 EIF6P56537 245 aaKnown RBP20.84■□□□□ 0.93
RTN4-201ENST00000317610 MOXD1Q6UVY6 613 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 PEX26Q7Z412 305 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 CLEC10AQ8IUN9 316 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 SYCE1Q8N0S2 351 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 TBC1D22AQ8WUA7 517 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 TTC7AQ9ULT0 858 aaPredicted RBP20.84■□□□□ 0.93
RTN4-201ENST00000317610 C5orf60A6NFR6 353 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 CALUO43852 315 aaPredicted RBP20.84■□□□□ 0.93
RTN4-201ENST00000317610 H2AFZP0C0S5 128 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 XRCC5P13010 732 aaKnown RBP20.84■□□□□ 0.93
RTN4-201ENST00000317610 BMT2Q1RMZ1 405 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 H2AFVQ71UI9 128 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 NT5DC3Q86UY8 548 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 SLFN12Q8IYM2 578 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 ARHGEF1Q92888 912 aaKnown RBP20.84■□□□□ 0.93
RTN4-201ENST00000317610 HES6Q96HZ4 224 aa20.84■□□□□ 0.93
RTN4-201ENST00000317610 USP17L10C9JJH3 530 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 SLC16A3O15427 465 aaKnown RBP20.83■□□□□ 0.93
RTN4-201ENST00000317610 UFL1O94874 794 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 SMTNP53814 917 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 PPP2R2AP63151 447 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 SPIRE1Q08AE8 756 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 IFT88Q13099 833 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 TMC3Q7Z5M5 1100 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 CCDC91Q7Z6B0 441 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 CCDC26Q8TAB7 109 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 METTL14Q9HCE5 456 aaKnown RBP20.83■□□□□ 0.93
RTN4-201ENST00000317610 PPANQ9NQ55 473 aaKnown RBP20.83■□□□□ 0.93
RTN4-201ENST00000317610 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.93
RTN4-201ENST00000317610 DAGLAQ9Y4D2 1042 aa20.83■□□□□ 0.93
RTN4-201ENST00000317610 POTEFA5A3E0 1075 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 GFPT2O94808 682 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 POTEIP0CG38 1075 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 ITGA4P13612 1032 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 FLT3P36888 993 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 POU5F1Q01860 360 aaKnown RBP20.83■□□□□ 0.92
RTN4-201ENST00000317610 SPDYCQ5MJ68 293 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 POTEGQ6S5H5 508 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.92
RTN4-201ENST00000317610 VPS36Q86VN1 386 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms