RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 GRIN1Q05586 938 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 UBE3CQ15386 1083 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TSC22D1Q15714 1073 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PTGISQ16647 500 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PDXDC1Q6P996 788 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SYCP3Q8IZU3 236 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CNBD1Q8NA66 436 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CFAP36Q96G28 342 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 HINFPQ9BQA5 517 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TMOD4Q9NZQ9 345 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SQORQ9Y6N5 450 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MGAMO43451 1857 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MCF2LO15068 1137 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SEC31AO94979 1220 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 HNRNPCP07910 306 aaKnown RBP eCLIP4.85□□□□□ -1.636e-7■□□□□ 10.9
CNOT1-201ENST00000317147 CCDC166P0CW27 439 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 KRT3P12035 628 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 S100A1P23297 94 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CABP4P57796 275 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 STAT4Q14765 748 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TCP11X2Q5H9J9 407 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 C16orf87Q6PH81 154 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 DTX3LQ8TDB6 740 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 EDC3Q96F86 508 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NHEJ1Q9H9Q4 299 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ARMCX3Q9UH62 379 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CAPN11Q9UMQ6 739 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 E7EWF7 191 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TRAF5O00463 557 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TTC4O95801 387 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TPD52P55327 224 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MED21Q13503 144 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ITGA9Q13797 1035 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NECTIN1Q15223 517 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CWF19L2Q2TBE0 894 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 BEND3Q5T5X7 828 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 KRT80Q6KB66 452 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NSUN7Q8NE18 718 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 WDR60Q8WVS4 1066 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 EEF2KMTQ96G04 330 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 LRGUKQ96M69 825 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PAGR1Q9BTK6 254 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 DNAJC12Q9UKB3 198 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PLAAQ9Y263 795 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ROS1P08922 2347 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC162PA2VCL2 907 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ARHGEF9O43307 516 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 DSG1Q02413 1049 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SPIDRQ14159 915 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 KRT81Q14533 505 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CCNI2Q6ZMN8 369 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 BZW1Q7L1Q6 419 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 FAM81AQ8TBF8 368 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MKNK2Q9HBH9 465 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NOD2Q9HC29 1040 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 EPB41L5Q9HCM4 733 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MTMR7Q9Y216 660 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 B4DLN1 442 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 E9PMD0 336 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MCF2P10911 925 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 COPS2P61201 443 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MAPRE2Q15555 327 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC144BQ3MJ40 725 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PAPD7Q5XG87 772 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 RSPH3Q86UC2 560 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MYOCDQ8IZQ8 938 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF513Q8N8E2 541 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF473Q8WTR7 871 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NRKQ7Z2Y5 1582 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ZDBF2Q9HCK1 2354 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 KCNK3O14649 394 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 GYG2O15488 501 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 FMNL1O95466 1100 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 RXRAP19793 462 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TNFAIP3P21580 790 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PRR16Q569H4 304 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF444Q8N0Y2 327 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CSRNP1Q96S65 589 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 METTL22Q9BUU2 404 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 FRMD8P1Q9BZ68 369 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PITPNM3Q9BZ71 974 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 LIMA1Q9UHB6 759 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 STK38LQ9Y2H1 464 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ACTL7BQ9Y614 415 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SDK2Q58EX2 2172 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PREX1Q8TCU6 1659 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PALLDQ8WX93 1383 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 VWA3AA6NCI4 1184 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 GCLCP48506 637 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 NPEPPSP55786 919 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 NLRP11P59045 1033 aaKnown RBP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 PDE4DQ08499 809 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC15Q0P6D6 951 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 PNOCQ13519 176 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
CNOT1-201ENST00000317147 TOGARAM2Q6ZUX3 1019 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 TRAPPC11Q7Z392 1133 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 NEK8Q86SG6 692 aa4.84□□□□□ -1.63
CNOT1-201ENST00000317147 MYCBPAPQ8TBZ2 947 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms