RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 AKR1B10O60218 316 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 EIF4A3P38919 411 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 FNTAP49354 379 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 STAT2P52630 851 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 GUCY1A3Q02108 690 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 CABS1Q96KC9 395 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 ERGIC2Q96RQ1 377 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 SPON1Q9HCB6 807 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 LTBP3Q9NS15 1303 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 APBA1Q02410 837 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 PDE4DQ08499 809 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 CFAP58Q5T655 872 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 FAM114A1Q8IWE2 563 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 KBTBD4Q9NVX7 518 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 PLAGL2Q9UPG8 496 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 ESYT3A0FGR9 886 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 BICDL2A1A5D9 508 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 EPHB6O15197 1021 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 LSP1P33241 339 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 CARSP49589 748 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 SETQ01105 290 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 CALCRLQ16602 461 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 FIGNQ5HY92 759 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 MS4A14Q96JA4 679 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 CXorf56Q9H5V9 222 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 GOPCQ9HD26 462 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 NFU1Q9UMS0 254 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 ATXN2Q99700 1313 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 ZSCAN5CA6NGD5 496 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 POTEMA6NI47 508 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 OPLAHO14841 1288 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 FAM153BP0C7A2 387 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 TNFRSF8P28908 595 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 STK4Q13043 487 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 PRKG1Q13976 671 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 FAM153CQ494X1 144 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 NAA35Q5VZE5 725 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 VCPKMTQ9H867 229 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 FAM153AQ9UHL3 310 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 SALL4Q9UJQ4 1053 aa18.86■□□□□ 0.61
SCAMP4-201ENST00000316097 MYH10P35580 1976 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 ZNF233A6NK53 670 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 PPP1R18Q6NYC8 613 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 KDM7AQ6ZMT4 941 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 IFT81Q8WYA0 676 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 ZKSCAN4Q969J2 545 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 MTMR9Q96QG7 549 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 FSBPO95073 299 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 MYL1P05976 194 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 GLI1P08151 1106 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 FCER1AP12319 257 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 HIRAP54198 1017 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 NAP1L1P55209 391 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 MAP3K10Q02779 954 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 IFT20Q8IY31 132 aa18.85■□□□□ 0.61
SCAMP4-201ENST00000316097 BUB1O43683 1085 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 DDNO94850 711 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 ASNSP08243 561 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 MAGEA1P43355 309 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 DNA2P51530 1060 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 TNFAIP1Q13829 316 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 BTNL9Q6UXG8 535 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 SPATS2Q86XZ4 545 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 NUDT12Q9BQG2 462 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 MMTAG2Q9BU76 263 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 TLR10Q9BXR5 811 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 EPN3Q9H201 632 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 EPB41L5Q9HCM4 733 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 DDX25Q9UHL0 483 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 HNRNPH3P31942 346 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 PRPHP41219 470 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 GUCY2FP51841 1108 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 RNF187Q5TA31 235 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 CABP7Q86V35 215 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 IQCKQ8N0W5 287 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 JPH2Q9BR39 696 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 MMRN2Q9H8L6 949 aa18.84■□□□□ 0.61
SCAMP4-201ENST00000316097 LAD1O00515 517 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 HEXIM1O94992 359 aaKnown RBP18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 PLCG1P19174 1290 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 NR1D1P20393 614 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 ASIC1P78348 528 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 GUCY2DQ02846 1103 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 MICALCLQ6ZW33 695 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 ZNF473Q8WTR7 871 aaKnown RBP18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 HAS1Q92839 578 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 HPS3Q969F9 1004 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 CCDC47Q96A33 483 aaKnown RBP18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 ANO3Q9BYT9 981 aa18.83■□□□□ 0.61
SCAMP4-201ENST00000316097 SEC24CP53992 1094 aa18.83■□□□□ 0.6
SCAMP4-201ENST00000316097 RRAGAQ7L523 313 aa18.83■□□□□ 0.6
SCAMP4-201ENST00000316097 LRRC53A6NM62 1247 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 PPP1R37O75864 691 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 UBXN2AP68543 259 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 CFAP221Q4G0U5 840 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 KLHDC7AQ5VTJ3 777 aa18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 PAXIP1Q6ZW49 1069 aaPredicted RBP18.82■□□□□ 0.6
SCAMP4-201ENST00000316097 CCSER1Q9C0I3 900 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms