RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RPUSD2Q8IZ73 545 aaKnown RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 BAIAP2L1Q9UHR4 511 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 BAG5Q9UL15 447 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 XRN1Q8IZH2 1706 aaKnown RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 NYAP1Q6ZVC0 841 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 MIGA2Q7L4E1 593 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 WDR75Q8IWA0 830 aaKnown RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ZMAT2Q96NC0 199 aaKnown RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 C8orf4Q9NR00 106 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 FAM207AQ9NSI2 230 aaPredicted RBP9.49□□□□□ -0.89
COL6A5-202ENST00000312481 ISM2Q6H9L7 571 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 CRLF3Q8IUI8 442 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 SLC35F6Q8N357 371 aa9.49□□□□□ -0.89
COL6A5-202ENST00000312481 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
COL6A5-202ENST00000312481 RIN3Q8TB24 985 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 CHGBP05060 677 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 CCT5P48643 541 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 GAS2L3Q86XJ1 694 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 KRT35Q92764 455 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
COL6A5-202ENST00000312481 MAGEB5Q9BZ81 275 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 WDR35Q9P2L0 1181 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 KDM3BQ7LBC6 1761 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 KRT31Q15323 416 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 FRMD3A2A2Y4 597 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 MEFVO15553 781 aaPredicted RBP9.48□□□□□ -0.89
COL6A5-202ENST00000312481 MTSS1O43312 755 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 GUCY2CP25092 1073 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 RARS2Q5T160 578 aaKnown RBP9.48□□□□□ -0.89
COL6A5-202ENST00000312481 CARD9Q9H257 536 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 TBC1D22BQ9NU19 505 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 HESX1Q9UBX0 185 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 KIF13BQ9NQT8 1826 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 DNA2P51530 1060 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 RFFLQ8WZ73 363 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 MAGOHBQ96A72 148 aaKnown RBP9.48□□□□□ -0.89
COL6A5-202ENST00000312481 ERGIC2Q96RQ1 377 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 NUP98P52948 1817 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 ARHGAP42A6NI28 874 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 ENO4A6NNW6 628 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 FAM107AO95990 144 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 HADHAP40939 763 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
COL6A5-202ENST00000312481 DAB2IPQ5VWQ8 1189 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 G2E3Q7L622 706 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
COL6A5-202ENST00000312481 CEMIPQ8WUJ3 1361 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 MAFGO15525 162 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 BFSP1Q12934 665 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 TFDP2Q14188 446 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 LRRC23Q53EV4 343 aaPredicted RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 SGO2Q562F6 1265 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 RILPQ96NA2 401 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 C7orf25Q9BPX7 421 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 MMADHCQ9H3L0 296 aaPredicted RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 A0A0A6YYK5 440 aaPredicted RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 GAS2O43903 313 aaKnown RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 ARL4CP56559 192 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 MMGT1Q8N4V1 131 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 PDXKO00764 312 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 MSH2P43246 934 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 MTBPQ96DY7 904 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 KLC2Q9H0B6 622 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 KDM4CQ9H3R0 1056 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 KPNA7A9QM74 516 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 EIF3HO15372 352 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 HDAC4P56524 1084 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 CDR2Q01850 454 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 MB21D1Q8N884 522 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 EPSTI1Q96J88 318 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 FAM124BQ9H5Z6 455 aaPredicted RBP9.47□□□□□ -0.89
COL6A5-202ENST00000312481 BLOC1S6Q9UL45 172 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 STXBP3O00186 592 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 PSMD3O43242 534 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 FAM186BQ8IYM0 893 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 FAM9CQ8IZT9 166 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 TNIP2Q8NFZ5 429 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 BACH1O14867 736 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 RANBP1P43487 201 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 KIAA0825Q8IV33 1275 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 ATP11CQ8NB49 1132 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 RDM1Q8NG50 284 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 VPS54Q9P1Q0 977 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 PARP3Q9Y6F1 533 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 EXOC1LA0A1B0GW35 172 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 ESRRBO95718 433 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 SERPINB2P05120 415 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 PTH1RQ03431 593 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 IFT88Q13099 833 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms