RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 RIN2Q8WYP3 895 aaPredicted RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 ZNF577Q9BSK1 485 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 LUC7LQ9NQ29 371 aaKnown RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 VAV3Q9UKW4 847 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 PITPNM2Q9BZ72 1349 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 MAP2K7O14733 419 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 TBX3O15119 743 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 PALMO75781 387 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 AFPP02771 609 aaKnown RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 EPB41P11171 864 aaKnown RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 DGKZQ13574 1117 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 MOXD1Q6UVY6 613 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 LRRC1Q9BTT6 524 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 ADAM21Q9UKJ8 722 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 HYOU1Q9Y4L1 999 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 ARP10275 920 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 COG2Q14746 738 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 AGBL1Q96MI9 1066 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 MBOAT7Q96N66 472 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
PTPN2-201ENST00000309660 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 COL11A2P13942 1736 aaPredicted RBP12.67□□□□□ -0.38
PTPN2-201ENST00000309660 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 HOXD13P35453 343 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 MAP9Q49MG5 647 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 SPATA4Q8NEY3 305 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 CHURC1Q8WUH1 139 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
PTPN2-201ENST00000309660 GCNT4Q9P109 453 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 EYA4O95677 639 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 RPL13P26373 211 aaKnown RBP12.67□□□□□ -0.38
PTPN2-201ENST00000309660 PTK2Q05397 1052 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 TTLL6Q8N841 843 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 DMGDHQ9UI17 866 aaKnown RBP12.67□□□□□ -0.38
PTPN2-201ENST00000309660 TMX2Q9Y320 296 aa12.67□□□□□ -0.38
PTPN2-201ENST00000309660 SSU72P8A0A1W2PR75 194 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 SLITRK3O94933 977 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 UCHL3P15374 230 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 FKBP1AP62942 108 aaKnown RBP12.66□□□□□ -0.38
PTPN2-201ENST00000309660 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 FAM178BQ8IXR5 827 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 ZNF341Q9BYN7 854 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 ACBD3Q9H3P7 528 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 IGLV3-22A0A075B6J6 115 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 TCP1P17987 556 aaKnown RBP12.66□□□□□ -0.38
PTPN2-201ENST00000309660 RXRBP28702 533 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 CEP55Q53EZ4 464 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 FAM151AQ8WW52 585 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
PTPN2-201ENST00000309660 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
PTPN2-201ENST00000309660 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ALAS1P13196 640 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 SLC18A3Q16572 532 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 MCTP2Q6DN12 878 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 SND1Q7KZF4 910 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 CCDC43Q96MW1 224 aaKnown RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 TRIM49P0CI25 452 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 TRIM49CP0CI26 452 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 CIITAP33076 1130 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 CYP2C19P33261 490 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ASTE1Q2TB18 679 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 KLHDC7AQ5VTJ3 777 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 FAM186BQ8IYM0 893 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 PARVGQ9HBI0 331 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ASTN1O14525 1302 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ESYT3A0FGR9 886 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ARHGEF35A5YM69 484 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 IPO5O00410 1097 aaKnown RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 PDXKO00764 312 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms