RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GUCY2CP25092 1073 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 KLK7P49862 253 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 KRT76Q01546 638 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 ADAM9Q13443 819 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 CCDC40Q4G0X9 1142 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 PRRT2Q7Z6L0 340 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 PROCA1Q8NCQ7 364 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 OR8K1Q8NGG5 319 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 PCMTD1Q96MG8 357 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 TTYH3Q9C0H2 523 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 PDXKO00764 312 aa23.48■■□□□ 1.35
ATG4D-201ENST00000309469 CXCL11O14625 94 aa23.48■■□□□ 1.35
ATG4D-201ENST00000309469 JAK3P52333 1124 aa23.48■■□□□ 1.35
ATG4D-201ENST00000309469 ZNF131P52739 623 aa23.48■■□□□ 1.35
ATG4D-201ENST00000309469 MARSP56192 900 aaKnown RBP23.48■■□□□ 1.35
ATG4D-201ENST00000309469 TTLL12Q14166 644 aaPredicted RBP23.48■■□□□ 1.35
ATG4D-201ENST00000309469 SEL1LQ9UBV2 794 aa23.48■■□□□ 1.35
ATG4D-201ENST00000309469 DBR1Q9UK59 544 aaKnown RBP23.48■■□□□ 1.35
ATG4D-201ENST00000309469 GOLGA6L9A6NEM1 432 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 GLTPD2A6NH11 291 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 SPDYE5A6NIY4 337 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 CETN3O15182 167 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 CCNE2O96020 404 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 TRIM21P19474 475 aaKnown RBP23.47■■□□□ 1.35
ATG4D-201ENST00000309469 SFNP31947 248 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 GTF2F1P35269 517 aaKnown RBP eCLIP23.47■■□□□ 1.35
ATG4D-201ENST00000309469 FIGNQ5HY92 759 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 CYP26C1Q6V0L0 522 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 DNAJC7Q99615 494 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 DESI2Q9BSY9 194 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 TCEAL9Q9UHQ7 104 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 WDR64B1ANS9 1081 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 RIOK3O14730 519 aaKnown RBP23.47■■□□□ 1.35
ATG4D-201ENST00000309469 EIF3DO15371 548 aaKnown RBP eCLIP23.47■■□□□ 1.35
ATG4D-201ENST00000309469 CALUO43852 315 aaPredicted RBP23.47■■□□□ 1.35
ATG4D-201ENST00000309469 ERVK-24P63145 666 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 PADI6Q6TGC4 694 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 KIF18AQ8NI77 898 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 IQCDQ96DY2 449 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 BTBD7Q9P203 1132 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
ATG4D-201ENST00000309469 CCDC175P0C221 793 aa23.46■■□□□ 1.35
ATG4D-201ENST00000309469 TYW1Q9NV66 732 aaKnown RBP23.46■■□□□ 1.35
ATG4D-201ENST00000309469 SIK3Q9Y2K2 1263 aa23.46■■□□□ 1.35
ATG4D-201ENST00000309469 ADGRG1Q9Y653 693 aa23.46■■□□□ 1.35
ATG4D-201ENST00000309469 STAM2O75886 525 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 RGS20O76081 388 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 ERCC3P19447 782 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 NR2F2P24468 414 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 NMT1P30419 496 aaKnown RBP23.45■■□□□ 1.35
ATG4D-201ENST00000309469 GPR162Q16538 588 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 TSR1Q2NL82 804 aaKnown RBP23.45■■□□□ 1.35
ATG4D-201ENST00000309469 RIOX2Q8IUF8 465 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 TRIM59Q8IWR1 403 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 C4orf19Q8IY42 314 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 RDM1Q8NG50 284 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 SENP7Q9BQF6 1050 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 AGPAT5Q9NUQ2 364 aa23.45■■□□□ 1.35
ATG4D-201ENST00000309469 ZC3H4Q9UPT8 1303 aaKnown RBP23.45■■□□□ 1.34
ATG4D-201ENST00000309469 A0A1W2PQJ5 194 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 PEX10O60683 326 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 RARRES1P49788 294 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 PSMC5P62195 406 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 ETF1P62495 437 aaKnown RBP23.45■■□□□ 1.34
ATG4D-201ENST00000309469 ZNF746Q6NUN9 644 aaPredicted RBP23.45■■□□□ 1.34
ATG4D-201ENST00000309469 ANKRD35Q8N283 1001 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 CDHR1Q96JP9 859 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 FIZ1Q96SL8 496 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 TAF1DQ9H5J8 278 aaPredicted RBP23.45■■□□□ 1.34
ATG4D-201ENST00000309469 FBXO40Q9UH90 709 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 KCNH4Q9UQ05 1017 aa23.45■■□□□ 1.34
ATG4D-201ENST00000309469 HIP1RO75146 1068 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 KCNA2P16389 499 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 YWHABP31946 246 aaKnown RBP23.44■■□□□ 1.34
ATG4D-201ENST00000309469 IRX3P78415 501 aaPredicted RBP23.44■■□□□ 1.34
ATG4D-201ENST00000309469 ZBED6P86452 979 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 PPIL2Q13356 520 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 UGCGQ16739 394 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 EAPPQ56P03 285 aaPredicted RBP23.44■■□□□ 1.34
ATG4D-201ENST00000309469 TRIM65Q6PJ69 517 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 SYT10Q6XYQ8 523 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 ZNF720Q7Z2F6 126 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 FAM178BQ8IXR5 827 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 IWS1Q96ST2 819 aa23.44■■□□□ 1.34
ATG4D-201ENST00000309469 MOV10L1Q9BXT6 1211 aaKnown RBP23.44■■□□□ 1.34
ATG4D-201ENST00000309469 KCNA1Q09470 495 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 MAPK7Q13164 816 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 ODR4Q5SWX8 454 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 DNERQ8NFT8 737 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 CHP1Q99653 195 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.43■■□□□ 1.34
ATG4D-201ENST00000309469 ASTN1O14525 1302 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 ZC2HC1CQ53FD0 456 aaPredicted RBP23.43■■□□□ 1.34
ATG4D-201ENST00000309469 STXBP4Q6ZWJ1 553 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 ARMC9Q7Z3E5 817 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 DAW1Q8N136 415 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 ZNF397Q8NF99 534 aaPredicted RBP23.43■■□□□ 1.34
ATG4D-201ENST00000309469 SPATC1LQ9H0A9 340 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 ASCC2Q9H1I8 757 aaPredicted RBP23.43■■□□□ 1.34
ATG4D-201ENST00000309469 FAM184BQ9ULE4 1060 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms