RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 OTUD6BQ8N6M0 293 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 NSMCE1Q8WV22 266 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 MRPL4Q9BYD3 311 aaKnown RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 TUFT1Q9NNX1 390 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 STARD7Q9NQZ5 370 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 KCNH7Q9NS40 1196 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 HBP1O60381 514 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 DGAT1O75907 488 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 TOMM70O94826 608 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ADORA2AP29274 412 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 POLR2BP30876 1174 aaKnown RBP10.1□□□□□ -0.79
PTPRE-202ENST00000306042 MFAP3P55082 362 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 BPIFB4P59827 614 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 PTK2Q05397 1052 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ZNF658Q5TYW1 1059 aaPredicted RBP10.1□□□□□ -0.79
PTPRE-202ENST00000306042 SPATA1Q5VX52 437 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 RIT2Q99578 217 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
PTPRE-202ENST00000306042 PHF20Q9BVI0 1012 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ZMYND12Q9H0C1 365 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ZC3H4Q9UPT8 1303 aaKnown RBP10.1□□□□□ -0.79
PTPRE-202ENST00000306042 RIC1Q4ADV7 1423 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 TBC1D12O60347 775 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 EFNA5P52803 228 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 RAD54LQ92698 747 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 RGL1Q9NZL6 768 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 USTQ9Y2C2 406 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 PCDHB4Q9Y5E5 795 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 UPP2O95045 317 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ANXA13P27216 316 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 OAZ1P54368 228 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 BFSP1Q12934 665 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 SFR1Q86XK3 245 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 CLMNQ96JQ2 1002 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 MOV10L1Q9BXT6 1211 aaKnown RBP10.1□□□□□ -0.79
PTPRE-202ENST00000306042 SLITRK6Q9H5Y7 841 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 KIAA1586Q9HCI6 787 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 HAUS2Q9NVX0 235 aa10.1□□□□□ -0.79
PTPRE-202ENST00000306042 ESPNB1AK53 854 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 RPS6KA5O75582 802 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 MXI1P50539 228 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 FAM193AP78312 1265 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 CYP26C1Q6V0L0 522 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 CEP57Q86XR8 500 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 THEM5Q8N1Q8 247 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 KLRG1Q96E93 195 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 CNOT6LQ96LI5 555 aaKnown RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 TSGA10Q9BZW7 698 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 PITPNM2Q9BZ72 1349 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 FAM117BQ6P1L5 589 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 AMIGO3Q86WK7 504 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 POLD4Q9HCU8 107 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 FAM50BQ9Y247 325 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 ATP11BQ9Y2G3 1177 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 MYPNQ86TC9 1320 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 C17orf102A2RUQ5 167 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 RPLP2P05387 115 aaKnown RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 TCF7P36402 384 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 CTCFP49711 727 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 PDIA5Q14554 519 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 ARMCX2Q7L311 632 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 SMYD4Q8IYR2 804 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 DNERQ8NFT8 737 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 PAGE5Q96GU1 130 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 LZTFL1Q9NQ48 299 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 SEL1LQ9UBV2 794 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 NFIBO00712 420 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 ADCY3O60266 1144 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 NPM3O75607 178 aaKnown RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 AKR1A1P14550 325 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 MCM3P25205 808 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 PRKCEQ02156 737 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 UNC13DQ70J99 1090 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
PTPRE-202ENST00000306042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPRE-202ENST00000306042 NKRFO15226 690 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 AFPP02771 609 aaKnown RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 IFFO1Q0D2I5 559 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 LONRF3Q496Y0 759 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 PGBD4Q96DM1 585 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 CHAMP1Q96JM3 812 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ABHD16BQ9H3Z7 469 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 RASAL2Q9UJF2 1139 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 EYA4O95677 639 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 POLR2FP61218 127 aaKnown RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 CKAP4Q07065 602 aaKnown RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 TMEM62Q0P6H9 643 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 FAM149B1Q96BN6 582 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms