RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 METTL14Q9HCE5 456 aaKnown RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ADARB2Q9NS39 739 aaKnown RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ZNF214Q9UL59 606 aaPredicted RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 COL11A1P12107 1806 aaPredicted RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ARHGEF35A5YM69 484 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 FANCGO15287 622 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 MAPTP10636 758 aaKnown RBP21.41■■□□□ 1.02
HOXC4-201ENST00000303406 NR2F2P24468 414 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 SFNP31947 248 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 JAK3P52333 1124 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 NEK11Q8NG66 645 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 GPRASP2Q96D09 838 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 WDR24Q96S15 920 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 HAUS4Q9H6D7 363 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 HOMER2Q9NSB8 354 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 HOXC10Q9NYD6 342 aa21.41■■□□□ 1.02
HOXC4-201ENST00000303406 WRAP73Q9P2S5 460 aaPredicted RBP21.41■■□□□ 1.02
HOXC4-201ENST00000303406 RRP9O43818 475 aaKnown RBP21.4■■□□□ 1.02
HOXC4-201ENST00000303406 PRPF6O94906 941 aaKnown RBP21.4■■□□□ 1.02
HOXC4-201ENST00000303406 GCNT3O95395 438 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 EIF2AK2P19525 551 aaKnown RBP21.4■■□□□ 1.02
HOXC4-201ENST00000303406 CCND2P30279 289 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 ARHGAP25P42331 645 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 MAP3K9P80192 1104 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 KRT76Q01546 638 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 ARHGEF16Q5VV41 709 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 SYN2Q92777 582 aaPredicted RBP21.4■■□□□ 1.02
HOXC4-201ENST00000303406 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 MMRN2Q9H8L6 949 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 ASTN1O14525 1302 aa21.4■■□□□ 1.02
HOXC4-201ENST00000303406 USP2O75604 605 aaPredicted RBP21.39■■□□□ 1.02
HOXC4-201ENST00000303406 STAM2O75886 525 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 QARSP47897 775 aaKnown RBP21.39■■□□□ 1.02
HOXC4-201ENST00000303406 KCNMA1Q12791 1236 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 ALCAMQ13740 583 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 PRAMEF18Q5VWM3 479 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 SNRNP48Q6IEG0 339 aaKnown RBP21.39■■□□□ 1.02
HOXC4-201ENST00000303406 NLRX1Q86UT6 975 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 VSIG10LQ86VR7 867 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 MYCT1Q8N699 235 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 TSC1Q92574 1164 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 FIZ1Q96SL8 496 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 SENP7Q9BQF6 1050 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 LZTFL1Q9NQ48 299 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 CEP72Q9P209 647 aa21.39■■□□□ 1.02
HOXC4-201ENST00000303406 REXO2Q9Y3B8 237 aaKnown RBP21.39■■□□□ 1.02
HOXC4-201ENST00000303406 URI1O94763 535 aaPredicted RBP21.39■■□□□ 1.01
HOXC4-201ENST00000303406 BAATQ14032 418 aaPredicted RBP21.39■■□□□ 1.01
HOXC4-201ENST00000303406 NSMFQ6X4W1 530 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 C4orf19Q8IY42 314 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 BANK1Q8NDB2 785 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 GOLGA5Q8TBA6 731 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 BAP1Q92560 729 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 WNK4Q96J92 1243 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 ZFP91Q96JP5 570 aaPredicted RBP21.39■■□□□ 1.01
HOXC4-201ENST00000303406 MKNK1Q9BUB5 465 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 ACAD9Q9H845 621 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 NHEJ1Q9H9Q4 299 aaPredicted RBP21.39■■□□□ 1.01
HOXC4-201ENST00000303406 ARMCX3Q9UH62 379 aaPredicted RBP21.39■■□□□ 1.01
HOXC4-201ENST00000303406 TCEAL9Q9UHQ7 104 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 RIPK3Q9Y572 518 aa21.39■■□□□ 1.01
HOXC4-201ENST00000303406 IPO7O95373 1038 aaKnown RBP21.38■■□□□ 1.01
HOXC4-201ENST00000303406 NR3C1P04150 777 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 MYBPC2Q14324 1141 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 PDXDC1Q6P996 788 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 ZNF720Q7Z2F6 126 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 STRA6Q9BX79 667 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 PCDHB13Q9Y5F0 798 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 MRFAP1Q9Y605 127 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 SNCAIPQ9Y6H5 919 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 A0A0G2JMZ2 1700 aa21.38■■□□□ 1.01
HOXC4-201ENST00000303406 WDR64B1ANS9 1081 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 LCA5LO95447 670 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 EPB41P11171 864 aaKnown RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 MYCLP12524 364 aaPredicted RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 RBM10P98175 930 aaKnown RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 TMEM132BQ14DG7 1078 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 ZNF746Q6NUN9 644 aaPredicted RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 PADI6Q6TGC4 694 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 FAM178BQ8IXR5 827 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 NSUN6Q8TEA1 469 aaKnown RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 TMEM174Q8WUU8 243 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 CDHR1Q96JP9 859 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 INPP4AQ96PE3 977 aaPredicted RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 FAM207AQ9NSI2 230 aaPredicted RBP21.37■■□□□ 1.01
HOXC4-201ENST00000303406 ANKEF1Q9NU02 776 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 ZMYM2Q9UBW7 1377 aa21.37■■□□□ 1.01
HOXC4-201ENST00000303406 SSU72P8A0A1W2PR75 194 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 SPDYE16A6NNV3 312 aaPredicted RBP21.36■■□□□ 1.01
HOXC4-201ENST00000303406 DDX39AO00148 427 aaKnown RBP21.36■■□□□ 1.01
HOXC4-201ENST00000303406 EPHB6O15197 1021 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 TGFB1I1O43294 461 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 PPP1R37O75864 691 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 NR3C2P08235 984 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 HERVK_113P62684 666 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 MAPK7Q13164 816 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 MAPK8IP2Q13387 824 aaPredicted RBP21.36■■□□□ 1.01
HOXC4-201ENST00000303406 EHBP1Q8NDI1 1231 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 PLCB1Q9NQ66 1216 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms