RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CCDC92Q53HC0 331 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 SESTD1Q86VW0 696 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MRFAP1Q9Y605 127 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 LRRIQ4A6NIV6 560 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 IRX1P78414 480 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 DHX34Q14147 1143 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 GRAMD1BQ3KR37 738 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 CAPN12Q6ZSI9 719 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 TRIML2Q8N7C3 387 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 EIF3DO15371 548 aaKnown RBP eCLIP8.2□□□□□ -1.15e-6■□□□□ 9.5
SF3B3-201ENST00000302516 PLCG1P19174 1290 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 GGCXP38435 758 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 RDH13Q8NBN7 331 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 FGD4Q96M96 766 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 BATF3Q9NR55 127 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 TRPA1O75762 1119 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MXI1P50539 228 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 USP14P54578 494 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 RNF207Q6ZRF8 634 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 ANO5Q75V66 913 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 TMCO5AQ8N6Q1 288 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 CFAP36Q96G28 342 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MLXIPQ9HAP2 919 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 KMT5AQ9NQR1 393 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 SUN2Q9UH99 717 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 NVLO15381 856 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 VPS39Q96JC1 886 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF577Q9BSK1 485 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 SNX25Q9H3E2 840 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 ABCA6Q8N139 1617 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 GFPT2O94808 682 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 PYGLP06737 847 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 BASP1P80723 227 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 TOGARAM2Q6ZUX3 1019 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 ARHGAP26Q9UNA1 814 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MED14O60244 1454 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 TMEM247A6NEH6 219 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ZFXP17010 805 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ABCB5Q2M3G0 1257 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 TTC39CQ8N584 583 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 MTRQ99707 1265 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.19□□□□□ -1.12e-8■■□□□ 12
SF3B3-201ENST00000302516 ZBED1O96006 694 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 DLGAP5Q15398 846 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 C1orf146Q5VVC0 180 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 LRIG3Q6UXM1 1119 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 UNC13DQ70J99 1090 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 LRRC43Q8N309 656 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 UBE2TQ9NPD8 197 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 E9PCH4 1651 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 FAM187AA6NFU0 413 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 RASA4BC9J798 803 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 COPEO14579 308 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 RASA4O43374 803 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NOP14P78316 857 aaKnown RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 MAPRE2Q15555 327 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NAA35Q5VZE5 725 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 SNF8Q96H20 258 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 TAF1DQ9H5J8 278 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 PLEKHG2Q9H7P9 1386 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 PDE8BO95263 885 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 FTCDO95954 541 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ADD2P35612 726 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NEK2P51955 445 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 STAT2P52630 851 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NUGGCQ68CJ6 796 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 C8orf37Q96NL8 207 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 TGS1Q96RS0 853 aaKnown RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 KIF2CQ99661 725 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 WNT8AQ9H1J5 351 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 SAT1P21673 171 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 POLA2Q14181 598 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF212Q9UDV6 495 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ACSL3O95573 720 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 BTDP43251 543 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 SF3A3Q12874 501 aaKnown RBP eCLIP8.19□□□□□ -1.18e-8■■■■□ 21.1
SF3B3-201ENST00000302516 ADCK5Q3MIX3 580 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 CAPRIN2Q6IMN6 1127 aaKnown RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NLRP14Q86W24 1093 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 CPXCR1Q8N123 301 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 EPN3Q9H201 632 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 KIAA1586Q9HCI6 787 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 DNAJC17Q9NVM6 304 aaKnown RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 LEMD3Q9Y2U8 911 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 CCDC22O60826 627 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 ZMYND10O75800 440 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 HSPA4LO95757 839 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 KRT4P19013 534 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 NCF2P19878 526 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 JAK3P52333 1124 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 CCDC127Q96BQ5 260 aa8.19□□□□□ -1.1
SF3B3-201ENST00000302516 DDX56Q9NY93 547 aaKnown RBP8.19□□□□□ -1.1
SF3B3-201ENST00000302516 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms