RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 TTBK2Q6IQ55 1244 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 TRIM56Q9BRZ2 755 aaKnown RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 DDX23Q9BUQ8 820 aaKnown RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 MROH8Q9H579 483 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 KIAA1586Q9HCI6 787 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 THPOP40225 353 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 MAGEA1P43355 309 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 CYP27A1Q02318 531 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 ZNF827Q17R98 1081 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 MICALCLQ6ZW33 695 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 TMEM39AQ9NV64 488 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 MYPNQ86TC9 1320 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 GSG1L2A8MUP6 293 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 IGSF3O75054 1194 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 ZBTB16Q05516 673 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 SPATA2LQ8IUW3 424 aaPredicted RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 CCDC105Q8IYK2 499 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 PGBD3Q8N328 593 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 PRMT6Q96LA8 375 aaPredicted RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 ACAP3Q96P50 834 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 UBE2TQ9NPD8 197 aaPredicted RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 MTMR4Q9NYA4 1195 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 PCDHA10Q9Y5I2 948 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 TMEM88BA6NKF7 163 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 PRRG1O14668 218 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 ITGA4P13612 1032 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 PLCG1P19174 1290 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 ARL4AP40617 200 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 RWDD4Q6NW29 188 aaKnown RBP9.24□□□□□ -0.93
SCN11A-201ENST00000302328 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
SCN11A-201ENST00000302328 RALAP11233 206 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 GRIK1P39086 918 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 TMEM62Q0P6H9 643 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 LGSNQ5TDP6 509 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 ATG9AQ7Z3C6 839 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 KIF12Q96FN5 646 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 YME1L1Q96TA2 773 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 BHMT2Q9H2M3 363 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 RRN3P2A6NIE6 340 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 H7C0C1 242 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 SLC16A4O15374 487 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 ATP5OP48047 213 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 ZNF699Q32M78 642 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 EFCAB13Q8IY85 973 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 TRMT2AQ8IZ69 625 aaKnown RBP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 CDCA5Q96FF9 252 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 CEP104O60308 925 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 NDUFB10O96000 172 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 CBX1P83916 185 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 LONRF2Q1L5Z9 754 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 GRK7Q8WTQ7 553 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 SOCS4Q8WXH5 440 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 CNOT6LQ96LI5 555 aaKnown RBP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 DDX50Q9BQ39 737 aaKnown RBP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 GOLGA8SH3BPF8 625 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 CAP2P40123 477 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 NR5A1Q13285 461 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 RNF187Q5TA31 235 aaPredicted RBP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 NBPF12Q5TAG4 269 aaPredicted RBP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 TRIML1Q8N9V2 468 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 FBXO18Q8NFZ0 1043 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 NEMP1O14524 444 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 ALX1Q15699 326 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 ARHGAP15Q53QZ3 475 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 TADA2BQ86TJ2 420 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 DDX53Q86TM3 631 aaKnown RBP9.23□□□□□ -0.93
SCN11A-201ENST00000302328 GDAP1Q8TB36 358 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 LXNQ9BS40 222 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 DYRK4Q9NR20 520 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
SCN11A-201ENST00000302328 MAP3K7O43318 606 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 OPA1O60313 960 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 MOCS3O95396 460 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 NSUN7Q8NE18 718 aaKnown RBP9.22□□□□□ -0.93
SCN11A-201ENST00000302328 HMX1Q9NP08 348 aaPredicted RBP9.22□□□□□ -0.93
SCN11A-201ENST00000302328 RGS12O14924 1447 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 SUPT20HL2P0C7V6 817 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 MAN1A1P33908 653 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 SDE2Q6IQ49 451 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 TMTC1Q8IUR5 882 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 SEPT1Q8WYJ6 367 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 DHTKD1Q96HY7 919 aaPredicted RBP9.22□□□□□ -0.93
SCN11A-201ENST00000302328 ZDHHC15Q96MV8 337 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 ADGRB2O60241 1585 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 MAGEB2O15479 319 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 KPNA6O60684 536 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 TUBB4AP04350 444 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 CYBBP04839 570 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 SKIP12755 728 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 YWHABP31946 246 aaKnown RBP9.22□□□□□ -0.93
SCN11A-201ENST00000302328 ACCSLQ4AC99 568 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 CCNYQ8ND76 341 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 CCDC110Q8TBZ0 833 aa9.22□□□□□ -0.93
SCN11A-201ENST00000302328 SCFD2Q8WU76 684 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms