RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CEP63Q96MT8 703 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 PANX2Q96RD6 677 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 ZSWIM4Q9H7M6 989 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 OLFML3Q9NRN5 406 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 RNF186Q9NXI6 227 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 TCEAL9Q9UHQ7 104 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 AGTPBP1Q9UPW5 1226 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 NFASCO94856 1347 aa13.3□□□□□ -0.28
TPM3-202ENST00000302206 NPHP3-ACAD11A0A0J9YXS1 232 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 FAM155AB1AL88 458 aaPredicted RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 CCP110O43303 1012 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 STX10O60499 249 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 TBCAO75347 108 aaKnown RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 GNA14O95837 355 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 SLC25A27O95847 323 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 TPM1P09493 284 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 ZNF157P51786 506 aaPredicted RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 ZNF131P52739 623 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 TC2NQ8N9U0 490 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 IQCDQ96DY2 449 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 CLMNQ96JQ2 1002 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 LXNQ9BS40 222 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 TUBGCP2Q9BSJ2 902 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 RUSC1Q9BVN2 902 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 TIPINQ9BVW5 301 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 VPS16Q9H269 839 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 GBA2Q9HCG7 927 aaPredicted RBP13.29□□□□□ -0.28
TPM3-202ENST00000302206 UBE4BO95155 1302 aa13.29□□□□□ -0.28
TPM3-202ENST00000302206 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 EIF3DO15371 548 aaKnown RBP eCLIP13.28□□□□□ -0.28
TPM3-202ENST00000302206 ARHGAP6O43182 974 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
TPM3-202ENST00000302206 OSBPP22059 807 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 FECHP22830 423 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 ICAM3P32942 547 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 FKBP1BP68106 108 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 UBXN1Q04323 297 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 MOGSQ13724 837 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 PLS1Q14651 629 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 GNPTABQ3T906 1256 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 LRRC55Q6ZSA7 311 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 CNGA4Q8IV77 575 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 C4orf19Q8IY42 314 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 GTF3C2Q8WUA4 911 aaPredicted RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 SCFD1Q8WVM8 642 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 OPTNQ96CV9 577 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 NAA15Q9BXJ9 866 aaKnown RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 SPATC1LQ9H0A9 340 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 ASCC2Q9H1I8 757 aaPredicted RBP13.28□□□□□ -0.28
TPM3-202ENST00000302206 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 BTBD7Q9P203 1132 aa13.28□□□□□ -0.28
TPM3-202ENST00000302206 TESPA1A2RU30 521 aaPredicted RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 ARHGEF35A5YM69 484 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 SPATA31C2B4DYI2 1134 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 PDXKO00764 312 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 FAM13AO94988 1023 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 TERF1P54274 439 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 PSMC5P62195 406 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 HERVK_113P62684 666 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 SNAPC2Q13487 334 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 LRRC41Q15345 812 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 MAN2A1Q16706 1144 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 STXBP4Q6ZWJ1 553 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 TMEM139Q8IV31 216 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 SMAP1Q8IYB5 467 aaPredicted RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 CCAR2Q8N163 923 aaKnown RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 RETREG2Q8NC44 543 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 PIGOQ8TEQ8 1089 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 ERGIC2Q96RQ1 377 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 NUP58Q9BVL2 599 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.29
TPM3-202ENST00000302206 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 LCTP09848 1927 aa13.27□□□□□ -0.29
TPM3-202ENST00000302206 LOC102724159A0A0B4J2E5 919 aa13.26□□□□□ -0.29
TPM3-202ENST00000302206 B4DLN1 442 aa13.26□□□□□ -0.29
TPM3-202ENST00000302206 DDX39AO00148 427 aaKnown RBP13.26□□□□□ -0.29
TPM3-202ENST00000302206 ATP9AO75110 1047 aa13.26□□□□□ -0.29
TPM3-202ENST00000302206 MFAP3LO75121 409 aa13.26□□□□□ -0.29
TPM3-202ENST00000302206 EIF3JO75822 258 aaKnown RBP13.26□□□□□ -0.29
TPM3-202ENST00000302206 CNMDO75829 334 aa13.26□□□□□ -0.29
TPM3-202ENST00000302206 TUBB4AP04350 444 aa13.26□□□□□ -0.29
TPM3-202ENST00000302206 MAPTP10636 758 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms