RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
DDB1-201ENST00000301764 CASKIN2Q8WXE0 1202 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
DDB1-201ENST00000301764 CCSER1Q9C0I3 900 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 PDHBP11177 359 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 SERPINB6P35237 376 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 BTDP43251 543 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 LRIG3Q6UXM1 1119 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 LRRC37BQ96QE4 947 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 CYTH2Q99418 400 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 CELF4Q9BZC1 486 aaKnown RBP16.49■□□□□ 0.23
DDB1-201ENST00000301764 VCPKMTQ9H867 229 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 SH3GLB2Q9NR46 395 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 BATF3Q9NR55 127 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 RAB20Q9NX57 234 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
DDB1-201ENST00000301764 KIF3CO14782 793 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 TNNI1P19237 187 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 BFSP1Q12934 665 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 SEPT6Q14141 434 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 TRPM8Q7Z2W7 1104 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 NUDCD1Q96RS6 583 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 PCIF1Q9H4Z3 704 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 DNAJC12Q9UKB3 198 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 EXOC7Q9UPT5 735 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 SYF2O95926 243 aaKnown RBP16.48■□□□□ 0.23
DDB1-201ENST00000301764 RPUSD2Q8IZ73 545 aaKnown RBP16.48■□□□□ 0.23
DDB1-201ENST00000301764 EDEM3Q9BZQ6 932 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 SALL1Q9NSC2 1324 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 MAP3K7O43318 606 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 ESRRAP11474 423 aaPredicted RBP16.48■□□□□ 0.23
DDB1-201ENST00000301764 AARSP49588 968 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDB1-201ENST00000301764 IRX1P78414 480 aaPredicted RBP16.48■□□□□ 0.23
DDB1-201ENST00000301764 SH3GL3Q99963 347 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 GNPATO15228 680 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 GLI1P08151 1106 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 CD19P15391 556 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 USP38Q8NB14 1042 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
DDB1-201ENST00000301764 A0A0G2JND7 137 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDB1-201ENST00000301764 TMEM60Q9H2L4 133 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 TMEM260Q9NX78 707 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 STOML1Q9UBI4 398 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
DDB1-201ENST00000301764 SKAP2O75563 359 aaPredicted RBP16.47■□□□□ 0.23
DDB1-201ENST00000301764 CASC4Q6P4E1 433 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 GSDMBQ8TAX9 411 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 NBPF3Q9H094 633 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 MAN1A1P33908 653 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
DDB1-201ENST00000301764 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
DDB1-201ENST00000301764 SH2D4BQ5SQS7 431 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 RAD54LQ92698 747 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 DONSONQ9NYP3 566 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 THRAP3Q9Y2W1 955 aaKnown RBP16.47■□□□□ 0.23
DDB1-201ENST00000301764 SYNGAP1Q96PV0 1343 aa16.47■□□□□ 0.23
DDB1-201ENST00000301764 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
DDB1-201ENST00000301764 ABL1P00519 1130 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 PRDX5P30044 214 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 SARSP49591 514 aaKnown RBP16.46■□□□□ 0.23
DDB1-201ENST00000301764 NTRK3Q16288 839 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 KCTD1Q719H9 257 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 RHOT2Q8IXI1 618 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.46■□□□□ 0.23
DDB1-201ENST00000301764 ISCUQ9H1K1 167 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 DCTN4Q9UJW0 460 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
DDB1-201ENST00000301764 NOL3O60936 208 aaKnown RBP16.46■□□□□ 0.23
DDB1-201ENST00000301764 SCTRP47872 440 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 ERGIC2Q96RQ1 377 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 TOM1O60784 492 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 DCTN3O75935 186 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 RWDD2BP57060 319 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 TMEM47Q9BQJ4 181 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 GGA1Q9UJY5 639 aa16.46■□□□□ 0.23
DDB1-201ENST00000301764 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
DDB1-201ENST00000301764 GYG2O15488 501 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.22
DDB1-201ENST00000301764 SPARCL1Q14515 664 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 AGBL2Q5U5Z8 902 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 SPATA21Q7Z572 469 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 CFAP57Q96MR6 1250 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 DCP1AQ9NPI6 582 aaPredicted RBP16.46■□□□□ 0.22
DDB1-201ENST00000301764 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.22
DDB1-201ENST00000301764 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
DDB1-201ENST00000301764 ACTN1P12814 892 aa16.45■□□□□ 0.22
DDB1-201ENST00000301764 YWHAGP61981 247 aaKnown RBP eCLIP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms