RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 ODF2Q5BJF6 829 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 MCTP2Q6DN12 878 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 SUGP1Q8IWZ8 645 aaKnown RBP17.46■□□□□ 0.39
GHDC-201ENST00000301671 DHX36Q9H2U1 1008 aaKnown RBP17.46■□□□□ 0.39
GHDC-201ENST00000301671 H0YGN5 161 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 RIMBP2O15034 1052 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 TTI1O43156 1089 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 SLC12A3P55017 1021 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 SEPT2Q15019 361 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 PEX26Q7Z412 305 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 CATSPER3Q86XQ3 398 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
GHDC-201ENST00000301671 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 TPCN2Q8NHX9 752 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 PLCB1Q9NQ66 1216 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 NR2E1Q9Y466 385 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 NFS1Q9Y697 457 aa17.46■□□□□ 0.39
GHDC-201ENST00000301671 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 TTLL1O95922 423 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 PLCG2P16885 1265 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 QPCTQ16769 361 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 PRR16Q569H4 304 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 CHADLQ6NUI6 762 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 P2RX7Q99572 595 aaKnown RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 CNOT8Q9UFF9 292 aaKnown RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 CCNL1Q9UK58 526 aaPredicted RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 PCDHB13Q9Y5F0 798 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 CDK5RAP2Q96SN8 1893 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 KDM3AQ9Y4C1 1321 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 PGRMC1O00264 195 aaKnown RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 ZBTB5O15062 677 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 AFPP02771 609 aaKnown RBP17.45■□□□□ 0.38
GHDC-201ENST00000301671 ARHGAP27Q6ZUM4 889 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 DAAM2Q86T65 1068 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 OSGEPQ9NPF4 335 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 POLLQ9UGP5 575 aa17.45■□□□□ 0.38
GHDC-201ENST00000301671 A6NNZ2 444 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 GFPT2O94808 682 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 SF3B2Q13435 895 aaKnown RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 GIT2Q14161 759 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 TUBB8Q3ZCM7 444 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 HYIQ5T013 277 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 CNPY4Q8N129 248 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 TRIM51Q9BSJ1 452 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 GGA1Q9UJY5 639 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 NOVA2Q9UNW9 492 aaKnown RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 XRCC5P13010 732 aaKnown RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 POLD1P28340 1107 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 SCNN1DP51172 638 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 GABPAQ06546 454 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 SPRED3Q2MJR0 410 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 FOXR2Q6PJQ5 311 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 PRPF38AQ8NAV1 312 aaKnown RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 CYFIP2Q96F07 1278 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.44■□□□□ 0.384e-6■□□□□ 8
GHDC-201ENST00000301671 PCDHA1Q9Y5I3 950 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 DDX3XO00571 662 aaKnown RBP eCLIP17.44■□□□□ 0.384e-6■□□□□ 10
GHDC-201ENST00000301671 ATP2C2O75185 946 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 PRPF4BQ13523 1007 aaKnown RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 PBKQ96KB5 322 aa17.44■□□□□ 0.38
GHDC-201ENST00000301671 ATF5Q9Y2D1 282 aaPredicted RBP17.44■□□□□ 0.38
GHDC-201ENST00000301671 IGKV6D-41A0A0C4DH26 115 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 FAM107AO95990 144 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 ZBTB48P10074 688 aaPredicted RBP17.43■□□□□ 0.38
GHDC-201ENST00000301671 ABCB4P21439 1286 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 IBSPP21815 317 aaPredicted RBP17.43■□□□□ 0.38
GHDC-201ENST00000301671 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 GPATCH11Q8N954 259 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 ANO3Q9BYT9 981 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 GCNT4Q9P109 453 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 IL1R1P14778 569 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 EPHA7Q15375 998 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 SIX2Q9NPC8 291 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 SERPINB13Q9UIV8 391 aa17.43■□□□□ 0.38
GHDC-201ENST00000301671 H2AFZP0C0S5 128 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 MAGOHP61326 146 aaKnown RBP17.42■□□□□ 0.38
GHDC-201ENST00000301671 DHX9Q08211 1270 aaKnown RBP17.42■□□□□ 0.38
GHDC-201ENST00000301671 CUL1Q13616 776 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 EMC10Q5UCC4 262 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 H2AFVQ71UI9 128 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 MDM1Q8TC05 714 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 MAGOHBQ96A72 148 aaKnown RBP17.42■□□□□ 0.38
GHDC-201ENST00000301671 CD248Q9HCU0 757 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 KCNMB3Q9NPA1 279 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 BCS1LQ9Y276 419 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 FLOT1O75955 427 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 FSBPO95073 299 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 GCNT3O95395 438 aa17.42■□□□□ 0.38
GHDC-201ENST00000301671 GCFC2P16383 781 aaKnown RBP17.42■□□□□ 0.38
GHDC-201ENST00000301671 SHMT1P34896 483 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms