RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 AADACL2Q6P093 401 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 FAXDC2Q96IV6 333 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 RAB34Q9BZG1 259 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 ATP6V0A4Q9HBG4 840 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 KCNK9Q9NPC2 374 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 TMOD4Q9NZQ9 345 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 BCS1LQ9Y276 419 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 CRYMQ14894 314 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 HOOK3Q86VS8 718 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 GPBP1Q86WP2 473 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
COL6A2-201ENST00000300527 ZMYND12Q9H0C1 365 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL6A2-201ENST00000300527 HDAC9Q9UKV0 1011 aa15.96■□□□□ 0.15
COL6A2-201ENST00000300527 PVALEFA0A1B0GWK0 134 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 FOXO6A8MYZ6 492 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 UBOX5O94941 541 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 XRCC4Q13426 336 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 TPCN2Q8NHX9 752 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 EPS8L3Q8TE67 593 aaKnown RBP15.96■□□□□ 0.14
COL6A2-201ENST00000300527 SH3RF3Q8TEJ3 882 aaPredicted RBP15.96■□□□□ 0.14
COL6A2-201ENST00000300527 AGAP11Q8TF27 550 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.14
COL6A2-201ENST00000300527 FAM129AQ9BZQ8 928 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 ATP8A2Q9NTI2 1148 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 NAGPAQ9UK23 515 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 PTPN22Q9Y2R2 807 aa15.96■□□□□ 0.14
COL6A2-201ENST00000300527 NUP188Q5SRE5 1749 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 CETN3O15182 167 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 SPICE1Q8N0Z3 855 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 KIF9Q9HAQ2 790 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 RIC8AQ9NPQ8 531 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 AMFRQ9UKV5 643 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 CLIC2O15247 247 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 PCP11498 1178 aaKnown RBP15.95■□□□□ 0.14
COL6A2-201ENST00000300527 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
COL6A2-201ENST00000300527 DR1Q01658 176 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 SLC29A2Q14542 456 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 GDAP1Q8TB36 358 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 YIPF3Q9GZM5 350 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 GGA2Q9UJY4 613 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 AGAP1Q9UPQ3 857 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 THRAP3Q9Y2W1 955 aaKnown RBP15.95■□□□□ 0.14
COL6A2-201ENST00000300527 DAAM1Q9Y4D1 1078 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
COL6A2-201ENST00000300527 CAMTA1Q9Y6Y1 1673 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 CCDC189A1A4V9 331 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 MEIS1O00470 390 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 FLOT1O75955 427 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 KCNQ4P56696 695 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 EXOC3L4Q17RC7 722 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 ERFEQ4G0M1 354 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 VPS36Q86VN1 386 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 CLEC10AQ8IUN9 316 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 STK17AQ9UEE5 414 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 TRIM33Q9UPN9 1127 aa15.95■□□□□ 0.14
COL6A2-201ENST00000300527 RBAK-RBAKDNI3L0D1 243 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 HIBADHP31937 336 aaKnown RBP15.94■□□□□ 0.14
COL6A2-201ENST00000300527 SATB1Q01826 763 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 TRPM8Q7Z2W7 1104 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 NEK9Q8TD19 979 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 KLHL29Q96CT2 875 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 EMILIN3Q9NT22 766 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 MINPP1Q9UNW1 487 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 UCHL3P15374 230 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 PMS2P54278 862 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 ERMARDQ5T6L9 678 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 LRRC47Q8N1G4 583 aaKnown RBP15.94■□□□□ 0.14
COL6A2-201ENST00000300527 FBXO25Q8TCJ0 367 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 KDM4CQ9H3R0 1056 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 ECT2Q9H8V3 914 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 GLI3P10071 1580 aa15.94■□□□□ 0.14
COL6A2-201ENST00000300527 COL1A1P02452 1464 aaPredicted RBP15.94■□□□□ 0.14
COL6A2-201ENST00000300527 POTEB3A0JP26 581 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 POTECB2RU33 542 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 IGF2BP3O00425 579 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 MGRN1O60291 552 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 BIRC2Q13490 618 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 POTEBQ6S5H4 581 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 GLYCTKQ8IVS8 523 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 CCDC65Q8IXS2 484 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 PAIP2Q9BPZ3 127 aaKnown RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 FAM114A2Q9NRY5 505 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 FGFR1OP2Q9NVK5 253 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 ARMCX3Q9UH62 379 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 USP17L5A8MUK1 530 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 PPIP5K2O43314 1243 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 MYBP10242 640 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 STAT3P40763 770 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 MRPL12P52815 198 aaKnown RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 EMC10Q5UCC4 262 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 ACTRT1Q8TDG2 376 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 SEMA4AQ9H3S1 761 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 CNOT10Q9H9A5 744 aaKnown RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 TMEM59LQ9UK28 342 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms