RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 N4BP3O15049 544 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 YWHABP31946 246 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 IRF2BP1Q8IU81 584 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 LRRC8AQ8IWT6 810 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 PARK7Q99497 189 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 MRPL44Q9H9J2 332 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 PARVGQ9HBI0 331 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 OLFML3Q9NRN5 406 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 TRPM7Q96QT4 1865 aa17.4■□□□□ 0.38
HERPUD1-201ENST00000300302 PGK2P07205 417 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 TGFB3P10600 412 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 COPB1P53618 953 aaKnown RBP17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 PADI6Q6TGC4 694 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 SMC1BQ8NDV3 1235 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 GLIS3Q8NEA6 775 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 CACTINQ8WUQ7 758 aaKnown RBP17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 SCFD1Q8WVM8 642 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 ANKEF1Q9NU02 776 aa17.39■□□□□ 0.38
HERPUD1-201ENST00000300302 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 NRDCO43847 1150 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 SFPQP23246 707 aaKnown RBP eCLIP17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 RARRES1P49788 294 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 FSTL1Q12841 308 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 OTUD6AQ7L8S5 288 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 TIPINQ9BVW5 301 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 TAB2Q9NYJ8 693 aa17.39■□□□□ 0.37
HERPUD1-201ENST00000300302 ZNF157P51786 506 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 ZNF131P52739 623 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 ACTR2P61160 394 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 FKBP3Q00688 224 aaKnown RBP17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 NEDD9Q14511 834 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 UGCGQ16739 394 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 FGFBP2Q9BYJ0 223 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 PORCNQ9H237 461 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 VPS16Q9H269 839 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 R3HDMLQ9H3Y0 253 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 EFCC1Q9HA90 598 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 GABBR1Q9UBS5 961 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 MORF4L1Q9UBU8 362 aa17.38■□□□□ 0.37
HERPUD1-201ENST00000300302 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 ZCWPW2Q504Y3 356 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 CYFIP1Q7L576 1253 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 EPM2AIP1Q7L775 607 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 NELFCDQ8IXH7 590 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 CNOT6LQ96LI5 555 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 TEX33O43247 280 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 STRNO43815 780 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 GCNT3O95395 438 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 MTIF2P46199 727 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 SP2Q02086 613 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 SP4Q02446 784 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 LRMPQ12912 555 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 BMT2Q1RMZ1 405 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 SWSAP1Q6NVH7 229 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 ABHD15Q6UXT9 468 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 KCTD10Q9H3F6 313 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 IVNS1ABPQ9Y6Y0 642 aa17.37■□□□□ 0.37
HERPUD1-201ENST00000300302 ASB14A6NK59 587 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 SFI1A8K8P3 1242 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 EIF3DO15371 548 aaKnown RBP eCLIP17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 HIP1RO75146 1068 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 SUPT20HL2P0C7V6 817 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 KNOP1Q1ED39 458 aaKnown RBP17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 EDRF1Q3B7T1 1238 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 XKR9Q5GH70 373 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 FAM178BQ8IXR5 827 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 ABRAQ8N0Z2 381 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 FGD4Q96M96 766 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 CEP63Q96MT8 703 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 LARSQ9P2J5 1176 aaKnown RBP17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 LRRC37A2A6NM11 1700 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 ITIH6Q6UXX5 1313 aa17.36■□□□□ 0.37
HERPUD1-201ENST00000300302 LGALS16A8MUM7 142 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 BACH1O14867 736 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 TOMM70O94826 608 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 MYBP10242 640 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 UBA1P22314 1058 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 CLCN1P35523 988 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 PBX1P40424 430 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 CASP5P51878 434 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 UBXN1Q04323 297 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 TBX2Q13207 712 aaPredicted RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 ARID5BQ14865 1188 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 ODR4Q5SWX8 454 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 UTP14CQ5TAP6 766 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 ARMCX5Q6P1M9 558 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms