RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SHBGP04278 402 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 FGFR4P22455 802 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 ASTE1Q2TB18 679 aaPredicted RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 CAPRIN2Q6IMN6 1127 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 KCNK18Q7Z418 384 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 CCT6BQ92526 530 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 NSUN4Q96CB9 384 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 IFT74Q96LB3 600 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 MMTAG2Q9BU76 263 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 ECT2Q9H8V3 914 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 KIF9Q9HAQ2 790 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 MAD2L2Q9UI95 211 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 NAGPAQ9UK23 515 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 PPP1R12AO14974 1030 aaPredicted RBP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 PCK1P35558 622 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 XRCC4Q13426 336 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 ARHGAP44Q17R89 818 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 PROM2Q8N271 834 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 C3orf20Q8ND61 904 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 PRCCQ92733 491 aaPredicted RBP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 FAM84BQ96KN1 310 aaPredicted RBP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 FAM129AQ9BZQ8 928 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 CLIC2O15247 247 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 UBOX5O94941 541 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 STAT1P42224 750 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 ADCY7P51828 1080 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 DIXDC1Q155Q3 683 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 UBE2SQ16763 222 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 TAOK1Q7L7X3 1001 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 STMN4Q9H169 189 aaPredicted RBP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 SLITRK6Q9H5Y7 841 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 RASGRF2O14827 1237 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 SLC37A4O43826 429 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 NOL4O94818 638 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 SUN1O94901 812 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 UCHL3P15374 230 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 GJB7Q6PEY0 223 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 TPCN2Q8NHX9 752 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 HOOK2Q96ED9 719 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 SAAL1Q96ER3 474 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 EYA3Q99504 573 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRUB1-201ENST00000298746 TMOD4Q9NZQ9 345 aa12.39□□□□□ -0.43
TRUB1-201ENST00000298746 GSTTP1A0A1W2PQM5 241 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 EVI5O60447 810 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 CLSTN1O94985 981 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 BAG3O95817 575 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 MRPL12P52815 198 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 KCNJ2P63252 427 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 PSMD2Q13200 908 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 UBE4AQ14139 1066 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 ACTRT1Q8TDG2 376 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 AGAP11Q8TF27 550 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 CALR3Q96L12 384 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 PNMA5Q96PV4 448 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 HOMER3Q9NSC5 361 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 FGFR1OP2Q9NVK5 253 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 ANKIB1Q9P2G1 1089 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 ACSL3O95573 720 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 MYBL1P10243 752 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 KLRK1P26718 216 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 TAF11Q15544 211 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 ERMARDQ5T6L9 678 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 VSIG1Q86XK7 387 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 ZNF34Q8IZ26 560 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 FBXO25Q8TCJ0 367 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 SCFD2Q8WU76 684 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 OSGEPQ9NPF4 335 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 CTTNBP2NLQ9P2B4 639 aa12.38□□□□□ -0.43
TRUB1-201ENST00000298746 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
TRUB1-201ENST00000298746 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 DNAJC8O75937 253 aaPredicted RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 LDHBP07195 334 aaKnown RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 TNFAIP3P21580 790 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 PDE6CP51160 858 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms