RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 NBPF12Q5TAG4 269 aaPredicted RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 NFRKBQ6P4R8 1299 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ARHGAP27Q6ZUM4 889 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 KLHL7Q8IXQ5 586 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 MICALL2Q8IY33 904 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 GPR161Q8N6U8 529 aaKnown RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ABCB6Q9NP58 842 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 VPS18Q9P253 973 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ARHGAP20Q9P2F6 1191 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 REXO2Q9Y3B8 237 aaKnown RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 TISP43B9A030 160 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 K7ENM7 598 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 LRRC63Q05C16 580 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 LONRF2Q1L5Z9 754 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 CEP55Q53EZ4 464 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 ARHGEF16Q5VV41 709 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 DNAJC19Q96DA6 116 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 BICD1Q96G01 975 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 MS4A14Q96JA4 679 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 EHD4Q9H223 541 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 VCPKMTQ9H867 229 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 LMAN1P49257 510 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 HMGCS2P54868 508 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 NPEPPSP55786 919 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 SOX10P56693 466 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 GPS2Q13227 327 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 AP3B2Q13367 1082 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 XKR9Q5GH70 373 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 ZFYVE27Q5T4F4 411 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 NAA35Q5VZE5 725 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 PHLDB2Q86SQ0 1253 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 ZNF507Q8TCN5 953 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 U2AF1L4Q8WU68 220 aaKnown RBP10.21□□□□□ -0.77
PRDM9-201ENST00000296682 TAF4BQ92750 862 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 ZNF668Q96K58 619 aaPredicted RBP10.21□□□□□ -0.77
PRDM9-201ENST00000296682 WRNIP1Q96S55 665 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 NAP1L4Q99733 375 aaKnown RBP10.21□□□□□ -0.77
PRDM9-201ENST00000296682 LXNQ9BS40 222 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 GTPBP4Q9BZE4 634 aaKnown RBP10.21□□□□□ -0.77
PRDM9-201ENST00000296682 MYOZ2Q9NPC6 264 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 PICK1Q9NRD5 415 aa10.21□□□□□ -0.77
PRDM9-201ENST00000296682 RPL13P26373 211 aaKnown RBP10.21□□□□□ -0.78
PRDM9-201ENST00000296682 OAS2P29728 719 aaKnown RBP10.21□□□□□ -0.78
PRDM9-201ENST00000296682 PPP1R2P41236 205 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 GIT2Q14161 759 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 ARSHQ5FYA8 562 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 PNKPQ96T60 521 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 SH2D4AQ9H788 454 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 PDE11AQ9HCR9 933 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 GPRC5CQ9NQ84 441 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 HERC5Q9UII4 1024 aaKnown RBP10.21□□□□□ -0.78
PRDM9-201ENST00000296682 CNOT7Q9UIV1 285 aaKnown RBP10.21□□□□□ -0.78
PRDM9-201ENST00000296682 CAPN6Q9Y6Q1 641 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 FER1L6Q2WGJ9 1857 aa10.21□□□□□ -0.78
PRDM9-201ENST00000296682 CALUO43852 315 aaPredicted RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 NR3C1P04150 777 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 CAP2P40123 477 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 ARHGAP25P42331 645 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 CLK2P49760 499 aaKnown RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 VSNL1P62760 191 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 SMC1AQ14683 1233 aaKnown RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 KNOP1Q1ED39 458 aaKnown RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 TATDN1Q6P1N9 297 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 FAM84AQ96KN4 292 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 RMDN3Q96TC7 470 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 KIFC3Q9BVG8 833 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 TEKT3Q9BXF9 490 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 FRMD4BQ9Y2L6 1034 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 A0A1W2PQC6 194 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 H2AFXP16104 143 aaPredicted RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 HLTFQ14527 1009 aaKnown RBP eCLIP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 TMEM132AQ24JP5 1023 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 PLA2G4FQ68DD2 849 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 TAAR1Q96RJ0 339 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 PAGR1Q9BTK6 254 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 WDR18Q9BV38 432 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 PACSIN1Q9BY11 444 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 DEFB129Q9H1M3 183 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 LUC7LQ9NQ29 371 aaKnown RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 GCNT4Q9P109 453 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 ZSCAN20P17040 1043 aaPredicted RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 RPA1P27694 616 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 GMPSP49915 693 aaPredicted RBP10.2□□□□□ -0.78
PRDM9-201ENST00000296682 PEX3P56589 373 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 FAM186BQ8IYM0 893 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 IL31RAQ8NI17 732 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 RABGGTAQ92696 567 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 UBXN6Q9BZV1 441 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 TRIM31Q9BZY9 425 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 PARVGQ9HBI0 331 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 TMX2Q9Y320 296 aa10.2□□□□□ -0.78
PRDM9-201ENST00000296682 AKAP3O75969 853 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 PSMD2Q13200 908 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 RINT1Q6NUQ1 792 aa10.19□□□□□ -0.78
PRDM9-201ENST00000296682 CC2D1AQ6P1N0 951 aaPredicted RBP10.19□□□□□ -0.78
PRDM9-201ENST00000296682 MSL3Q8N5Y2 521 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms