RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SCFD1Q8WVM8 642 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 TELO2Q9Y4R8 837 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 GAP43P17677 238 aa25.32■■□□□ 1.64
PTX3-201ENST00000295927 YWHABP31946 246 aaKnown RBP25.32■■□□□ 1.64
PTX3-201ENST00000295927 GSDMDP57764 484 aa25.32■■□□□ 1.64
PTX3-201ENST00000295927 LRRC63Q05C16 580 aa25.32■■□□□ 1.64
PTX3-201ENST00000295927 EEF2KMTQ96G04 330 aa25.32■■□□□ 1.64
PTX3-201ENST00000295927 MPHOSPH6Q99547 160 aaKnown RBP25.32■■□□□ 1.64
PTX3-201ENST00000295927 RTN4Q9NQC3 1192 aaKnown RBP25.32■■□□□ 1.64
PTX3-201ENST00000295927 PLXNB2O15031 1838 aa25.32■■□□□ 1.64
PTX3-201ENST00000295927 SFI1A8K8P3 1242 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 TEX33O43247 280 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 SORBS3O60504 671 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 FAM13AO94988 1023 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 EEF1GP26641 437 aaKnown RBP25.31■■□□□ 1.64
PTX3-201ENST00000295927 COPB1P53618 953 aaKnown RBP25.31■■□□□ 1.64
PTX3-201ENST00000295927 ACTR2P61160 394 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 SP4Q02446 784 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 LRMPQ12912 555 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 TAB2Q9NYJ8 693 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 MAGEC2Q9UBF1 373 aaPredicted RBP25.31■■□□□ 1.64
PTX3-201ENST00000295927 MORF4L1Q9UBU8 362 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 KIF20AO95235 890 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 GUCY2CP25092 1073 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 RARRES1P49788 294 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 CASP5P51878 434 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 FOXR2Q6PJQ5 311 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 PADI6Q6TGC4 694 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 LRRC8AQ8IWT6 810 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 TSG101Q99816 390 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 VPS16Q9H269 839 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 ODF2LQ9ULJ1 636 aa25.31■■□□□ 1.64
PTX3-201ENST00000295927 MCM3APO60318 1980 aa25.3■■□□□ 1.64
PTX3-201ENST00000295927 PSAPP07602 524 aa25.3■■□□□ 1.64
PTX3-201ENST00000295927 ZCWPW2Q504Y3 356 aa25.3■■□□□ 1.64
PTX3-201ENST00000295927 CYFIP1Q7L576 1253 aa25.3■■□□□ 1.64
PTX3-201ENST00000295927 EPM2AIP1Q7L775 607 aaPredicted RBP25.3■■□□□ 1.64
PTX3-201ENST00000295927 NELFCDQ8IXH7 590 aa25.3■■□□□ 1.64
PTX3-201ENST00000295927 PARK7Q99497 189 aaKnown RBP25.3■■□□□ 1.64
PTX3-201ENST00000295927 GABBR1Q9UBS5 961 aa25.3■■□□□ 1.64
PTX3-201ENST00000295927 ZNF157P51786 506 aaPredicted RBP25.29■■□□□ 1.64
PTX3-201ENST00000295927 ABHD15Q6UXT9 468 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 EEPD1Q7L9B9 569 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 RASAL3Q86YV0 1011 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 FAM114A1Q8IWE2 563 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 MYCT1Q8N699 235 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 MRPL44Q9H9J2 332 aaKnown RBP25.29■■□□□ 1.64
PTX3-201ENST00000295927 PARVGQ9HBI0 331 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 OLFML3Q9NRN5 406 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 PLXNA1Q9UIW2 1896 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 TMEM150BA6NC51 233 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 N4BP3O15049 544 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 ZNF131P52739 623 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 SPECC1LQ69YQ0 1117 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 SWSAP1Q6NVH7 229 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 CNOT6LQ96LI5 555 aaKnown RBP25.29■■□□□ 1.64
PTX3-201ENST00000295927 KCTD10Q9H3F6 313 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 ANKEF1Q9NU02 776 aa25.29■■□□□ 1.64
PTX3-201ENST00000295927 MYH9P35579 1960 aaKnown RBP25.28■■□□□ 1.64
PTX3-201ENST00000295927 MYBP10242 640 aa25.28■■□□□ 1.64
PTX3-201ENST00000295927 UBA1P22314 1058 aaKnown RBP25.28■■□□□ 1.64
PTX3-201ENST00000295927 UTP14CQ5TAP6 766 aaKnown RBP25.28■■□□□ 1.64
PTX3-201ENST00000295927 ATP6V0A1Q93050 837 aa25.28■■□□□ 1.64
PTX3-201ENST00000295927 ZNF862O60290 1169 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 PBX1P40424 430 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 MIS18BP1Q6P0N0 1132 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 TRMT1LQ7Z2T5 733 aaKnown RBP25.27■■□□□ 1.64
PTX3-201ENST00000295927 CCDC60Q8IWA6 550 aaPredicted RBP25.27■■□□□ 1.64
PTX3-201ENST00000295927 CCDC43Q96MW1 224 aaKnown RBP25.27■■□□□ 1.64
PTX3-201ENST00000295927 SH2D3AQ9BRG2 576 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 SEL1LQ9UBV2 794 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 BACH1O14867 736 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 DKC1O60832 514 aaKnown RBP eCLIP25.27■■□□□ 1.64
PTX3-201ENST00000295927 HIP1RO75146 1068 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 FGFR1OPO95684 399 aaKnown RBP25.27■■□□□ 1.64
PTX3-201ENST00000295927 SUPT20HL2P0C7V6 817 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 TGFB3P10600 412 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 MAPK7Q13164 816 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 PLA2G4FQ68DD2 849 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 ARMCX5Q6P1M9 558 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 CCDC150Q8NCX0 1101 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 MORC4Q8TE76 937 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 PYCARDQ9ULZ3 195 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 ARID2Q68CP9 1835 aa25.27■■□□□ 1.64
PTX3-201ENST00000295927 GCNT3O95395 438 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 TBX2Q13207 712 aaPredicted RBP25.26■■□□□ 1.63
PTX3-201ENST00000295927 XKR9Q5GH70 373 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 LRRC55Q6ZSA7 311 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 ANO5Q75V66 913 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 SAPCD2Q86UD0 394 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 DAW1Q8N136 415 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 SYNGAP1Q96PV0 1343 aa25.26■■□□□ 1.63
PTX3-201ENST00000295927 LOC102724159A0A0B4J2E5 919 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 USO1O60763 962 aaKnown RBP25.25■■□□□ 1.63
PTX3-201ENST00000295927 PRPF6O94906 941 aaKnown RBP25.25■■□□□ 1.63
PTX3-201ENST00000295927 STBD1O95210 358 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 ATG7O95352 703 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 HOXD13P35453 343 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 NPEPPSP55786 919 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 NEDD9Q14511 834 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms