RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 GOLGA8KD6RF30 607 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 GCNT3O95395 438 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 AFPP02771 609 aaKnown RBP21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 XRCC5P13010 732 aaKnown RBP21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 PDCLQ13371 301 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 SH3BP5LQ7L8J4 393 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 KSR1Q8IVT5 923 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 SPICE1Q8N0Z3 855 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 AP1M1Q9BXS5 423 aa21.42■■□□□ 1.02
NKX6-1-201ENST00000295886 GRIN2DO15399 1336 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 CYP3A7-CYP3A51PA0A087WV96 503 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 F5H6K3 240 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 ZBTB39O15060 712 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 OPA1O60313 960 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 CYP3A7P24462 503 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 MAGEA9P43362 315 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 ICA1Q05084 483 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 KLRC3Q07444 240 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 ZC3H3Q8IXZ2 948 aaKnown RBP21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 BCAS4Q8TDM0 211 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 ZNF233A6NK53 670 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 EML1O00423 815 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 ARHGAP27Q6ZUM4 889 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 SYT2Q8N9I0 419 aaPredicted RBP21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 CRYGNQ8WXF5 182 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 RUBCNQ92622 972 aa21.41■■□□□ 1.02
NKX6-1-201ENST00000295886 PITPNM2Q9BZ72 1349 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 SPDYE3A6NKU9 549 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 CEP104O60308 925 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 RPA1P27694 616 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 JAG1P78504 1218 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 RPS6KA1Q15418 735 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 GLE1Q53GS7 698 aaKnown RBP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 CFAP58Q5T655 872 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 ALKBH5Q6P6C2 394 aaKnown RBP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 DDX42Q86XP3 938 aaKnown RBP eCLIP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 USP38Q8NB14 1042 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 GJD4Q96KN9 370 aaPredicted RBP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 NAP1L4Q99733 375 aaKnown RBP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 ZNF219Q9P2Y4 722 aaPredicted RBP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 NAGPAQ9UK23 515 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 ASTN1O14525 1302 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 MYO3BQ8WXR4 1341 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 MSH4O15457 936 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 CHMP2AO43633 222 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 NR3C1P04150 777 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 NNTQ13423 1086 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 TTC31Q49AM3 519 aaPredicted RBP21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 ALS2CLQ60I27 953 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 TAF4BQ92750 862 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 CCDC17Q96LX7 622 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 MBOAT7Q96N66 472 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 FAM198AQ9UFP1 575 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 TRAF3IP3Q9Y228 551 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 SUGT1Q9Y2Z0 365 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 SAMM50Q9Y512 469 aa21.4■■□□□ 1.02
NKX6-1-201ENST00000295886 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 TNFRSF8P28908 595 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 PAK2Q13177 524 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 CTTNQ14247 550 aaKnown RBP21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 HHIPL2Q6UWX4 724 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 SEPT12Q8IYM1 358 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 PIK3R5Q8WYR1 880 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 AMNQ9BXJ7 453 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 GCNT4Q9P109 453 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 RNF14Q9UBS8 474 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 TMCO5BA8MYB1 307 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 HLTFQ14527 1009 aaKnown RBP eCLIP21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 ZC2HC1CQ53FD0 456 aaPredicted RBP21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 EPM2AIP1Q7L775 607 aaPredicted RBP21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 PACS2Q86VP3 889 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 FBXO11Q86XK2 927 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 ERMNQ8TAM6 284 aa21.39■■□□□ 1.01
NKX6-1-201ENST00000295886 NDUFB10O96000 172 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 HOXA7P31268 230 aaPredicted RBP21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 UBXN2AP68543 259 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 EPHA7Q15375 998 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 FRMD5Q7Z6J6 570 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 IQCKQ8N0W5 287 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 DCAF4Q8WV16 495 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 LTBP1Q14766 1721 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 KLRG2A4D1S0 409 aaPredicted RBP21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 OPLAHO14841 1288 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 EIF3HO15372 352 aaKnown RBP eCLIP21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 ZEB2O60315 1214 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 KIF4AO95239 1232 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 NMT1P30419 496 aaKnown RBP21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 ZNF76P36508 570 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 SIX2Q9NPC8 291 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
NKX6-1-201ENST00000295886 GFPT2O94808 682 aa21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 CORO7P57737 925 aa21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 AP3B2Q13367 1082 aa21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 COG2Q14746 738 aa21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 SAMD1Q6SPF0 538 aaPredicted RBP21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 SLC35C1Q96A29 364 aa21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 EIF2AK1Q9BQI3 630 aaKnown RBP21.37■■□□□ 1.01
NKX6-1-201ENST00000295886 THSD7AQ9UPZ6 1657 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms