RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
NXF1-201ENST00000294172 IKZF4Q9H2S9 585 aa15.41■□□□□ 0.06
NXF1-201ENST00000294172 SLC38A10Q9HBR0 1119 aa15.41■□□□□ 0.06
NXF1-201ENST00000294172 CEP72Q9P209 647 aa15.41■□□□□ 0.06
NXF1-201ENST00000294172 PCDHA13Q9Y5I0 950 aa15.41■□□□□ 0.06
NXF1-201ENST00000294172 NR3C1P04150 777 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 ATP1A1P05023 1023 aaKnown RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 SPP2Q13103 211 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 ZC2HC1CQ53FD0 456 aaPredicted RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 DCAF17Q5H9S7 520 aaPredicted RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 TMCO3Q6UWJ1 677 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 ZNF662Q6ZS27 426 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 EDEM3Q9BZQ6 932 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 TYW1Q9NV66 732 aaKnown RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 AKAP3O75969 853 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 EIF2AK2P19525 551 aaKnown RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 AMPD2Q01433 879 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 ARID5AQ03989 594 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 WHAMMP3Q1A5X7 153 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 SFMBT2Q5VUG0 894 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 SECISBP2LQ93073 1101 aaKnown RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 RIT2Q99578 217 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 PARD6BQ9BYG5 372 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
NXF1-201ENST00000294172 OLFML3Q9NRN5 406 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 ASTN1O14525 1302 aa15.4■□□□□ 0.06
NXF1-201ENST00000294172 USO1O60763 962 aaKnown RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 RPL13P26373 211 aaKnown RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 CASP4P49662 377 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 ENOX2Q16206 610 aaKnown RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 BMT2Q1RMZ1 405 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 MIER3Q7Z3K6 550 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 SYTL5Q8TDW5 730 aaPredicted RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 ZKSCAN4Q969J2 545 aaPredicted RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 SAMM50Q9Y512 469 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 FER1L6Q2WGJ9 1857 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 CTAGE15A4D2H0 777 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 ARHGEF35A5YM69 484 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 SRGAP2O75044 1071 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 CTAGE8P0CG41 777 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
NXF1-201ENST00000294172 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 MAEAQ7L5Y9 396 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 CTAGE6Q86UF2 777 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 CTAGE4Q8IX94 777 aa15.39■□□□□ 0.05
NXF1-201ENST00000294172 ZBED4O75132 1171 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 SEC31AO94979 1220 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 AFPP02771 609 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 EPB41P11171 864 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 ACTN1P12814 892 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 RPS6P62753 249 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 TKFCQ3LXA3 575 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 ODR4Q5SWX8 454 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 HGSNATQ68CP4 663 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 B3GNT9Q6UX72 402 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 FAM178BQ8IXR5 827 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 RPTORQ8N122 1335 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 ATAD5Q96QE3 1844 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 TAAR1Q96RJ0 339 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 SAR1BQ9Y6B6 198 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 FRMPD4Q14CM0 1322 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 TGFB1I1O43294 461 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 TLR2O60603 784 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 MAGEA1P43355 309 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 DMTNQ08495 405 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 MTMR1Q13613 665 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 NSMFQ6X4W1 530 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 TRMT1LQ7Z2T5 733 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 PURBQ96QR8 312 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 NUCKS1Q9H1E3 243 aaKnown RBP15.38■□□□□ 0.05
NXF1-201ENST00000294172 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
NXF1-201ENST00000294172 BCRP11274 1271 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 SLC9A1P19634 815 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 MUTP22033 750 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 ITGB3BPQ13352 177 aaPredicted RBP15.37■□□□□ 0.05
NXF1-201ENST00000294172 R3HDM1Q15032 1099 aaKnown RBP15.37■□□□□ 0.05
NXF1-201ENST00000294172 PCNX4Q63HM2 1172 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 WNK4Q96J92 1243 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 CAPZA3Q96KX2 299 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 TRERF1Q96PN7 1200 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 WRNIP1Q96S55 665 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 AGO4Q9HCK5 861 aaKnown RBP15.37■□□□□ 0.05
NXF1-201ENST00000294172 EIF3DO15371 548 aaKnown RBP eCLIP15.37■□□□□ 0.05
NXF1-201ENST00000294172 LCA5LO95447 670 aa15.37■□□□□ 0.05
NXF1-201ENST00000294172 SERPING1P05155 500 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms