RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PRKG1Q13976 671 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 LRRC41Q15345 812 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 FAM167BQ9BTA0 163 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 MMEP08473 750 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ALAS1P13196 640 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 NPR1P16066 1061 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 HNRNPH1P31943 449 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 NOP14P78316 857 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ACTN3Q08043 901 aaPredicted RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 CALN1Q9BXU9 219 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 CUEDC2Q9H467 287 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 MID2Q9UJV3 735 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ZBTB1Q9Y2K1 713 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 PPP6R2O75170 966 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 SNUPNO95149 360 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 CHGBP05060 677 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 RAP1GDS1P52306 607 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 FOXD4Q12950 439 aaPredicted RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 PABPC4Q13310 644 aaKnown RBP eCLIP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 SPOUT1Q5T280 376 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 DARS2Q6PI48 645 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 VSTM4Q8IW00 320 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 BBS5Q8N3I7 341 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 GIPC2Q8TF65 315 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 SAMSN1Q9NSI8 373 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 GFPT2O94808 682 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 POLR2MP0CAP2 368 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PDE6AP16499 860 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PSMC2P35998 433 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 ARHGDIAP52565 204 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 MRPS25P82663 173 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 DAB2P98082 770 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 THOC5Q13769 683 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 ARHGEF16Q5VV41 709 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 TRIM67Q6ZTA4 783 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 FAM47EQ6ZV65 393 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PDIK1LQ8N165 341 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 SDR42E1Q8WUS8 393 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 NHEJ1Q9H9Q4 299 aaPredicted RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 OVOS2A0A0G2JMS6 1433 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 SORBS3O60504 671 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 HDLBPQ00341 1268 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PSMD2Q13200 908 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 DPP8Q6V1X1 898 aaPredicted RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 GRAMD1CQ8IYS0 662 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 DACH2Q96NX9 599 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 TRIM55Q9BYV6 548 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 CD2BP2O95400 341 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PLS3P13797 630 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 RANBP1P43487 201 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 CCDC92Q53HC0 331 aaPredicted RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 CRLF3Q8IUI8 442 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 ZNF513Q8N8E2 541 aaPredicted RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 SSH3Q8TE77 659 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 KIFC3Q9BVG8 833 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 ING2Q9H160 280 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 GINM1Q9NU53 330 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 POLR3EQ9NVU0 708 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 STK32BQ9NY57 414 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PLAAQ9Y263 795 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 CUL1Q13616 776 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 VPS72Q15906 364 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 GLE1Q53GS7 698 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 CAPRIN2Q6IMN6 1127 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 WDR75Q8IWA0 830 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 ENOX1Q8TC92 643 aaKnown RBP11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 PYROXD1Q8WU10 500 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 FHOD1Q9Y613 1164 aa11.54□□□□□ -0.56
PKNOX1-201ENST00000291547 IQANK1A0A1B0GTG1 560 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 GTPBP10A4D1E9 387 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 PYGBP11216 843 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 TMPRSS15P98073 1019 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 SPARCL1Q14515 664 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 CDC26Q8NHZ8 85 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 TTC17Q96AE7 1141 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 USP40Q9NVE5 1235 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 FNDC3AQ9Y2H6 1198 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 hCG_2014768A0A024R1R8 64 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 SYCE1LA8MT33 242 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 DNAJC6O75061 913 aa11.53□□□□□ -0.56
PKNOX1-201ENST00000291547 SLC4A1P02730 911 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms