RNA–Protein interactions for RNA: ENST00000291535.11

UBASH3A-201, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3A, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-201ENST00000291535 GOLPH3Q9H4A6 298 aa13.3□□□□□ -0.28
UBASH3A-201ENST00000291535 CXorf56Q9H5V9 222 aa13.3□□□□□ -0.28
UBASH3A-201ENST00000291535 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
UBASH3A-201ENST00000291535 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
UBASH3A-201ENST00000291535 INTUQ9ULD6 942 aa13.3□□□□□ -0.28
UBASH3A-201ENST00000291535 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
UBASH3A-201ENST00000291535 PITPNM2Q9BZ72 1349 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 C21orf2O43822 256 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 ACTN1P12814 892 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 CYP11B2P19099 503 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 JAM2P57087 298 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 ANKRD20A8PQ5CZ79 823 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 ALKBH5Q6P6C2 394 aaKnown RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 CCDC121Q6ZUS5 278 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 C15orf52Q6ZUT6 534 aaKnown RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 NELFCDQ8IXH7 590 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 OLIG1Q8TAK6 271 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 RBM46Q8TBY0 533 aaKnown RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 P3H4Q92791 437 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 TLCD1Q96CP7 247 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 HES6Q96HZ4 224 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 SEC16BQ96JE7 1060 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 AP1M1Q9BXS5 423 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 DDX47Q9H0S4 455 aaKnown RBP13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 F8VZ95 297 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 CETN3O15182 167 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 PPFIA2O75334 1257 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 PLA2G4BP0C869 781 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 ITGA4P13612 1032 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 SLC9A1P19634 815 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 PON1P27169 355 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 TMOD1P28289 359 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 ARSHQ5FYA8 562 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 CENPTQ96BT3 561 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 CD248Q9HCU0 757 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 TBC1D7Q9P0N9 293 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
UBASH3A-201ENST00000291535 MYH7BA7E2Y1 1941 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 DCDC2CA8MYV0 355 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 E9PMD0 336 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 KRIT1O00522 736 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 DAPK3O43293 454 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 PPP1R11O60927 126 aaPredicted RBP13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 HOXD13P35453 343 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 TNNI2P48788 182 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 RHBDL3P58872 404 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 EPHA7Q15375 998 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 HERC4Q5GLZ8 1057 aaPredicted RBP13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 BICDL1Q6ZP65 573 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 EPM2AIP1Q7L775 607 aaPredicted RBP13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 SIX2Q9NPC8 291 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 AMACRQ9UHK6 382 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 MCM8Q9UJA3 840 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 PCDHA12Q9UN75 941 aa13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
UBASH3A-201ENST00000291535 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 FLOT1O75955 427 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 DRD4P21917 467 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 BTDP43251 543 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 XRCC4Q13426 336 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 GPBP1Q86WP2 473 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 CCDC125Q86Z20 511 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 ATP8B4Q8TF62 1192 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 LMBR1Q8WVP7 490 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 CCT6BQ92526 530 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 GJA10Q969M2 543 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 CENPHQ9H3R5 247 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 JMJD4Q9H9V9 463 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 KCNMB3Q9NPA1 279 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 FAM114A2Q9NRY5 505 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 KIAA1024Q9UPX6 916 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
UBASH3A-201ENST00000291535 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 CNTNAP4Q9C0A0 1308 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 F8W031 263 aaPredicted RBP13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 CCDC172P0C7W6 258 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 GHRP10912 638 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 NR2F2P24468 414 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 UBE2SQ16763 222 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 EXOC3L4Q17RC7 722 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 ERMARDQ5T6L9 678 aa13.27□□□□□ -0.29
UBASH3A-201ENST00000291535 CYB5D1Q6P9G0 228 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms