RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 KCNQ4P56696 695 aa22.25■■□□□ 1.15
TMED4-201ENST00000289577 LRRC47Q8N1G4 583 aaKnown RBP22.25■■□□□ 1.15
TMED4-201ENST00000289577 RBM46Q8TBY0 533 aaKnown RBP22.25■■□□□ 1.15
TMED4-201ENST00000289577 FAM163AQ96GL9 167 aaPredicted RBP22.25■■□□□ 1.15
TMED4-201ENST00000289577 GPCPD1Q9NPB8 672 aa22.25■■□□□ 1.15
TMED4-201ENST00000289577 SWAP70Q9UH65 585 aa22.25■■□□□ 1.15
TMED4-201ENST00000289577 POTEB3A0JP26 581 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 C5orf60A6NFR6 353 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 POTECB2RU33 542 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 KRIT1O00522 736 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 FLOT1O75955 427 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 AFPP02771 609 aaKnown RBP22.24■■□□□ 1.15
TMED4-201ENST00000289577 FLT3P36888 993 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 MRPL12P52815 198 aaKnown RBP22.24■■□□□ 1.15
TMED4-201ENST00000289577 SLC12A3P55017 1021 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 PPP2R2AP63151 447 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 POTEBQ6S5H4 581 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 ADGRF4Q8IZF3 695 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 LMBR1Q8WVP7 490 aa22.24■■□□□ 1.15
TMED4-201ENST00000289577 NAP1L4Q99733 375 aaKnown RBP22.24■■□□□ 1.15
TMED4-201ENST00000289577 ACTR5Q9H9F9 607 aaPredicted RBP22.24■■□□□ 1.15
TMED4-201ENST00000289577 ARMCX3Q9UH62 379 aaPredicted RBP22.24■■□□□ 1.15
TMED4-201ENST00000289577 ATF5Q9Y2D1 282 aaPredicted RBP22.24■■□□□ 1.15
TMED4-201ENST00000289577 ZNF543Q08ER8 600 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 GRAPQ13588 217 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 NFIXQ14938 502 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 EXOC3L4Q17RC7 722 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 TMC3Q7Z5M5 1100 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 GRAPLQ8TC17 118 aaPredicted RBP22.23■■□□□ 1.15
TMED4-201ENST00000289577 CNOT8Q9UFF9 292 aaKnown RBP22.23■■□□□ 1.15
TMED4-201ENST00000289577 INTUQ9ULD6 942 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 ITGA4P13612 1032 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 NPEPPSP55786 919 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 JAM2P57087 298 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 PEX26Q7Z412 305 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 KCNMB3Q9NPA1 279 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 KLC4Q9NSK0 619 aa22.23■■□□□ 1.15
TMED4-201ENST00000289577 DAPK3O43293 454 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 CASP5P51878 434 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 EPHA7Q15375 998 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 DNAAF5Q86Y56 855 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 UBLCP1Q8WVY7 318 aaPredicted RBP22.22■■□□□ 1.15
TMED4-201ENST00000289577 GPR101Q96P66 508 aaPredicted RBP22.22■■□□□ 1.15
TMED4-201ENST00000289577 AMACRQ9UHK6 382 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 RPS6KA4O75676 772 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 H2AFZP0C0S5 128 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 TMOD1P28289 359 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 HOXD13P35453 343 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 GABPAQ06546 454 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 RC3H1Q5TC82 1133 aaKnown RBP22.22■■□□□ 1.15
TMED4-201ENST00000289577 CCDC121Q6ZUS5 278 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 H2AFVQ71UI9 128 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 EPM2AIP1Q7L775 607 aaPredicted RBP22.22■■□□□ 1.15
TMED4-201ENST00000289577 NT5DC3Q86UY8 548 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 PROCA1Q8NCQ7 364 aaPredicted RBP22.22■■□□□ 1.15
TMED4-201ENST00000289577 CCDC26Q8TAB7 109 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 DHX36Q9H2U1 1008 aaKnown RBP22.22■■□□□ 1.15
TMED4-201ENST00000289577 CD209Q9NNX6 404 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 SIX2Q9NPC8 291 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 GAKO14976 1311 aa22.22■■□□□ 1.15
TMED4-201ENST00000289577 POU5F1Q01860 360 aaKnown RBP22.21■■□□□ 1.15
TMED4-201ENST00000289577 QPCTQ16769 361 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 KNOP1Q1ED39 458 aaKnown RBP22.21■■□□□ 1.15
TMED4-201ENST00000289577 SYCE1Q8N0S2 351 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 RAPGEF5Q92565 580 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 HES6Q96HZ4 224 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 OSBPL7Q9BZF2 842 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 TTC7AQ9ULT0 858 aaPredicted RBP22.21■■□□□ 1.15
TMED4-201ENST00000289577 FOCADQ5VW36 1801 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 TMCO5BA8MYB1 307 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 CHUKO15111 745 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 MED24O75448 989 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 KRT18P05783 430 aaKnown RBP22.21■■□□□ 1.15
TMED4-201ENST00000289577 PSTPIP2Q9H939 334 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 SLC40A1Q9NP59 571 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 FAM114A2Q9NRY5 505 aa22.21■■□□□ 1.15
TMED4-201ENST00000289577 NOVA2Q9UNW9 492 aaKnown RBP22.21■■□□□ 1.15
TMED4-201ENST00000289577 F8VZ95 297 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 AKR1B1P15121 316 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 PTPROQ16827 1216 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 SPDYCQ5MJ68 293 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 ARMC9Q7Z3E5 817 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 SEC16BQ96JE7 1060 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 MBOAT7Q96N66 472 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 TXLNGYQ9BZA5 131 aa22.2■■□□□ 1.14
TMED4-201ENST00000289577 AJAP1Q9UKB5 411 aaPredicted RBP22.2■■□□□ 1.14
TMED4-201ENST00000289577 CYP3A7-CYP3A51PA0A087WV96 503 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 DDX3XO00571 662 aaKnown RBP eCLIP22.19■■□□□ 1.141e-39■■■□□ 17.8
TMED4-201ENST00000289577 PDXKO00764 312 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 TTI1O43156 1089 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 XRCC5P13010 732 aaKnown RBP22.19■■□□□ 1.14
TMED4-201ENST00000289577 IL1R1P14778 569 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 CYP3A7P24462 503 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 BYSLQ13895 437 aaKnown RBP22.19■■□□□ 1.14
TMED4-201ENST00000289577 GIT2Q14161 759 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 VPS36Q86VN1 386 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 BCCIPQ9P287 314 aaKnown RBP eCLIP22.19■■□□□ 1.14
TMED4-201ENST00000289577 C10orf71Q711Q0 1435 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 SPATA31A5Q5VU36 1347 aa22.19■■□□□ 1.14
TMED4-201ENST00000289577 SPATA31A7Q8IWB4 1347 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms