RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 HIP1RO75146 1068 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 LRRN2O75325 713 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 KRT13P13646 458 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 RDXP35241 583 aaKnown RBP9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 RRAGAQ7L523 313 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 POMGNT1Q8WZA1 660 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 GUCA1BQ9UMX6 200 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 FRMD4BQ9Y2L6 1034 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 LUC7L2Q9Y383 392 aaKnown RBP9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 AFG3L2Q9Y4W6 797 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 COL11A2P13942 1736 aaPredicted RBP9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 KRT19P08727 400 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 TRIM49P0CI25 452 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 TRIM49CP0CI26 452 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 SMARCA1P28370 1054 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 CYLC1P35663 651 aaPredicted RBP9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 KLK7P49862 253 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 ARMCX5Q6P1M9 558 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 TTC16Q8NEE8 873 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 ATP6V0A1Q93050 837 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 CCSER1Q9C0I3 900 aa9.93□□□□□ -0.82
CCDC144B-201ENST00000285176 MACROD2A1Z1Q3 448 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 ERICH4A6NGS2 130 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 CETPP11597 493 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 TNNI1P19237 187 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 POLR2AP24928 1970 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 DMP1Q13316 513 aaPredicted RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 PRPF4BQ13523 1007 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 OTUD6AQ7L8S5 288 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 RHPN2Q8IUC4 686 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 CCDC42Q96M95 316 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 BEGAINQ9BUH8 593 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 STK17AQ9UEE5 414 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 PCDHA10Q9Y5I2 948 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 LAMA4Q16363 1823 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 OPLAHO14841 1288 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 ALS2CR12Q96Q35 445 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 HINFPQ9BQA5 517 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 MMTAG2Q9BU76 263 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 FGFBP2Q9BYJ0 223 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 KMT5AQ9NQR1 393 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 CYP39A1Q9NYL5 469 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 CGNQ9P2M7 1197 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 ZNF286BP0CG31 522 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 EPB41P11171 864 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 ADORA2AP29274 412 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 MRPS9P82933 396 aaKnown RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 APBA1Q02410 837 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 PPATQ06203 517 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 LLGL1Q15334 1064 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 SPECC1LQ69YQ0 1117 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 BAG1Q99933 345 aaPredicted RBP9.92□□□□□ -0.82
CCDC144B-201ENST00000285176 P4HBP07237 508 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 C6orf222P0C671 652 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 NT5C2P49902 561 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 RNASE9P60153 205 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ERVK-9P63128 1117 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ERVK-24P63145 666 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 RBL2Q08999 1139 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 THNSL1Q8IYQ7 743 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 FUCA2Q9BTY2 467 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 BLOC1S4Q9NUP1 217 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ARMCX3Q9UH62 379 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 PSAPP07602 524 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 GJB1P08034 283 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 SSTR3P32745 418 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 LIG4P49917 911 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ACTR2P61160 394 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 POLR2FP61218 127 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 SETQ01105 290 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 PRKCEQ02156 737 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 STRN3Q13033 797 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 UNC13DQ70J99 1090 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 SESTD1Q86VW0 696 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 C4orf32Q8N8J7 132 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 RGS22Q8NE09 1264 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 PLEKHA4Q9H4M7 779 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ZNF302Q9NR11 478 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ZNF214Q9UL59 606 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 AKR1B15C9JRZ8 316 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 H0YHG0 523 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 CYP11B2P19099 503 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 PRPHP41219 470 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 ADCYAP1R1P41586 468 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 CASP5P51878 434 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 MIS18BP1Q6P0N0 1132 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 PHLDB2Q86SQ0 1253 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 TAX1BP1Q86VP1 789 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 FNBP1Q96RU3 617 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 FBXO40Q9UH90 709 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 PITPNM2Q9BZ72 1349 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 MYL3P08590 195 aa9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 XRCC5P13010 732 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 TCF7P36402 384 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-201ENST00000285176 NFX1Q12986 1120 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms