RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SNX12Q9UMY4 172 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 GOLGA6CA6NDK9 693 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 ZNF185O15231 689 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 CPP00450 1065 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 GOLGA6DP0CG33 693 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 SPATA31C1P0DKV0 1188 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 SPA17Q15506 151 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 HOOK2Q96ED9 719 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 ERGIC2Q96RQ1 377 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 GOLGA6AQ9NYA3 693 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 VAV3Q9UKW4 847 aa20.14■□□□□ 0.82
PDLIM3-201ENST00000284767 CHMP2AO43633 222 aa20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 CTNND1O60716 968 aaKnown RBP20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 C2orf54Q08AI8 447 aa20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 SPP2Q13103 211 aa20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 PACS2Q86VP3 889 aa20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 UPF1Q92900 1129 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 RAVER2Q9HCJ3 691 aaKnown RBP20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 RGL1Q9NZL6 768 aa20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 COL20A1Q9P218 1284 aa20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 MRPL11Q9Y3B7 192 aaKnown RBP20.14■□□□□ 0.81
PDLIM3-201ENST00000284767 PVALEFA0A1B0GWK0 134 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 PLA2G6O60733 806 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 USO1O60763 962 aaKnown RBP20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 EPS15P42566 896 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 COASYQ13057 564 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 GBP6Q6ZN66 633 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 GSPT2Q8IYD1 628 aaKnown RBP20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 WNK4Q96J92 1243 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 CNOT6LQ96LI5 555 aaKnown RBP20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 GDAP1L1Q96MZ0 367 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 NT5C3AQ9H0P0 336 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 KDM3AQ9Y4C1 1321 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 MACROD2A1Z1Q3 448 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 TACC1O75410 805 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 CYP3A4P08684 503 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 VCAM1P19320 739 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 EHHADHQ08426 723 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 PPFIA1Q13136 1202 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 PABPC4Q13310 644 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 PRKG1Q13976 671 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 MCTP2Q6DN12 878 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 GPBP1Q86WP2 473 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 CREG2Q8IUH2 290 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 ABCB11O95342 1321 aa20.13■□□□□ 0.81
PDLIM3-201ENST00000284767 GOLGA8KD6RF30 607 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 FLOT1O75955 427 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 HNRNPH3P31942 346 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 HIRAP54198 1017 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 ARSHQ5FYA8 562 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 CCDC42Q96M95 316 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 WRNIP1Q96S55 665 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 KIAA1683Q9H0B3 1180 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 PLEKHA4Q9H4M7 779 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 BCAS3Q9H6U6 928 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 DUSP10Q9Y6W6 482 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 A0A087WUV0 522 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 TBX3O15119 743 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 ALAS1P13196 640 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 CYP11B2P19099 503 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 ICE2Q659A1 982 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 PRPF38AQ8NAV1 312 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 PCMTD1Q96MG8 357 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 PANK4Q9NVE7 773 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 GGA3Q9NZ52 723 aa20.12■□□□□ 0.81
PDLIM3-201ENST00000284767 WDR46O15213 610 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 ICAM1P05362 532 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 MTIF2P46199 727 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 KLK7P49862 253 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 CYP27A1Q02318 531 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 FKBP15Q5T1M5 1219 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 FAM20AQ96MK3 541 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 NOC4LQ9BVI4 516 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 ZHX3Q9H4I2 956 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 ARP10275 920 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 IRAK1P51617 712 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 SLC12A3P55017 1021 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 MIIPQ5JXC2 388 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 CENPPQ6IPU0 288 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 SH3GL2Q99962 352 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 PKD2L1Q9P0L9 805 aa20.11■□□□□ 0.81
PDLIM3-201ENST00000284767 ZBTB39O15060 712 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 OPA1O60313 960 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 HAUS3Q68CZ6 603 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 TADA2BQ86TJ2 420 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 IL31RAQ8NI17 732 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 CLEC4DQ8WXI8 215 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 GPRC5DQ9NZD1 345 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 ZNF263O14978 683 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 TCP1P17987 556 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 RPA1P27694 616 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 CTTNQ14247 550 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 COBLL1Q53SF7 1204 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 LPAR1Q92633 364 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 EIF2AK1Q9BQI3 630 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 PLAGL2Q9UPG8 496 aa20.1■□□□□ 0.81
PDLIM3-201ENST00000284767 LCA5LO95447 670 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms