RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 CALN1Q9BXU9 219 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 GCOM2Q9BZD3 368 aaPredicted RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 FAM170AA1A519 330 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ACSL3O95573 720 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ESRRBO95718 433 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ABL1P00519 1130 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 PDHA1P08559 390 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SOX5P35711 763 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 CTSWP56202 376 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MRPS15P82914 257 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MRPL28Q13084 256 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 TCIRG1Q13488 830 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ARL13BQ3SXY8 428 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 BEND6Q5SZJ8 279 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SLFN13Q68D06 897 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ATP6V1G3Q96LB4 118 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ASPSCR1Q9BZE9 553 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 NEUROG2Q9H2A3 272 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 UBE2TQ9NPD8 197 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 KMT5AQ9NQR1 393 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 KLC4Q9NSK0 619 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 TRAF3IP3Q9Y228 551 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MMP1P03956 469 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 RFX1P22670 979 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 GGCXP38435 758 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 PMS2P54278 862 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 EIF4A1P60842 406 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 DYNLT1P63172 113 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MYO1EQ12965 1108 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ARL6IP4Q66PJ3 421 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 RSRC2Q7L4I2 434 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 HIPK4Q8NE63 616 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 COG4Q9H9E3 785 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 UBN1Q9NPG3 1134 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 TRIP13Q15645 432 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 APOA5Q6Q788 366 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 EAF2Q96CJ1 260 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 OSBPL9Q96SU4 736 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MXD3Q9BW11 206 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 DNAJC17Q9NVM6 304 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 EHD2Q9NZN4 543 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 CEP72Q9P209 647 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 NDUFB9Q9Y6M9 179 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 FRMPD2Q68DX3 1309 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 H0Y626 953 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 TRIM16O95361 564 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 COPS2P61201 443 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ICA1Q05084 483 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MED21Q13503 144 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 OR6B2Q6IFH4 312 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 CMTR1Q8N1G2 835 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 FAF2Q96CS3 445 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SAMSN1Q9NSI8 373 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 THRAP3Q9Y2W1 955 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 PCDHA1Q9Y5I3 950 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 MORC2Q9Y6X9 1032 aaPredicted RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 WDR17Q8IZU2 1322 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 WDR64B1ANS9 1081 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SLC7A5Q01650 507 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 EFTUD2Q15029 972 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 TARSL2A2RTX5 802 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 FOXP2O15409 715 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 TMCC1O94876 653 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 DCAF15Q66K64 600 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 PATL1Q86TB9 770 aaKnown RBP9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 SUGCTQ9HAC7 445 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 ETNK1Q9HBU6 452 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 GJA3Q9Y6H8 435 aa9.33□□□□□ -0.92
SCUBE3-201ENST00000274938 PMLP29590 882 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 PSMC1P62191 440 aaKnown RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 C16orf96A6NNT2 1141 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CIAO1O76071 339 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 ALDH1B1P30837 517 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 POLA2Q14181 598 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 NDUFAF2Q8N183 169 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 TBC1D23Q9NUY8 699 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CHRNA3P32297 505 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CARSP49589 748 aaKnown RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 ARMCX2Q7L311 632 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 KIRREL3Q8IZU9 778 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 PARD3BQ8TEW8 1205 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 PAGE5Q96GU1 130 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 SLITRK6Q9H5Y7 841 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 GIMAP4Q9NUV9 329 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 ZNF711Q9Y462 761 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 STXBP3O00186 592 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 SRGAP2CP0DJJ0 459 aa9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 MAGOHP61326 146 aaKnown RBP9.32□□□□□ -0.92
SCUBE3-201ENST00000274938 CYP4A11Q02928 519 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms