RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 KAT2BQ92831 832 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 CDK5RAP3Q96JB5 506 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 CRISPLD2Q9H0B8 497 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 ERAP1Q9NZ08 941 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 H3BRB1 525 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 POLR2DO15514 142 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 LIG1P18858 919 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 SYKP43405 635 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 PRKCEQ02156 737 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 FAM160A1Q05DH4 1040 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 SNW1Q13573 536 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 KCNA10Q16322 511 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 RRAGBQ5VZM2 374 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 KCNK18Q7Z418 384 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 FMR1NBQ8N0W7 255 aaPredicted RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 PDILTQ8N807 584 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 ARRDC4Q8NCT1 418 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 RASSF8Q8NHQ8 419 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 PLIN2Q99541 437 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 PYM1Q9BRP8 204 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 TSEN34Q9BSV6 310 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 PANK2Q9BZ23 570 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 TUT1Q9H6E5 874 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 ZNF215Q9UL58 517 aaPredicted RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 SCN10AQ9Y5Y9 1956 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 SGPL1O95470 568 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 MYL3P08590 195 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 XRCC6P12956 609 aaKnown RBP eCLIP19.24■□□□□ 0.67
SKP2-201ENST00000274254 PSMC6P62333 389 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
SKP2-201ENST00000274254 NACC1Q96RE7 527 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 BLOC1S4Q9NUP1 217 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
SKP2-201ENST00000274254 HAS3O00219 553 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 DNM1LO00429 736 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 ZBTB39O15060 712 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 OATP04181 439 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 ASGR1P07306 291 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 MARK3P27448 753 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 YWHABP31946 246 aaKnown RBP19.23■□□□□ 0.67
SKP2-201ENST00000274254 PLCB4Q15147 1175 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 XKR3Q5GH77 459 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 ANO5Q75V66 913 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 IQUBQ8NA54 791 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 PIGOQ8TEQ8 1089 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 ATP8B4Q8TF62 1192 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 DHX58Q96C10 678 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 FAM167AQ96KS9 214 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 MTG1Q9BT17 334 aaPredicted RBP19.23■□□□□ 0.67
SKP2-201ENST00000274254 RNPEPQ9H4A4 650 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
SKP2-201ENST00000274254 A0A087WWV3 80 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 MOXD2PA6NHM9 499 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 NR1I2O75469 434 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 ZNF202O95125 648 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 MYCNP04198 464 aaPredicted RBP19.22■□□□□ 0.67
SKP2-201ENST00000274254 STAT6P42226 847 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 GJA8P48165 433 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 ACLYP53396 1101 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 CKAP2LQ8IYA6 745 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 GPT2Q8TD30 523 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 BBXQ8WY36 941 aaPredicted RBP19.22■□□□□ 0.67
SKP2-201ENST00000274254 KATNAL1Q9BW62 490 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 CUEDC2Q9H467 287 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 ANKEF1Q9NU02 776 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 USP25Q9UHP3 1055 aa19.22■□□□□ 0.67
SKP2-201ENST00000274254 DBR1Q9UK59 544 aaKnown RBP19.22■□□□□ 0.67
SKP2-201ENST00000274254 E9PMD0 336 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 ACTN4O43707 911 aaKnown RBP19.21■□□□□ 0.67
SKP2-201ENST00000274254 EYA4O95677 639 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 MFSD10Q14728 455 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 NFKBIBQ15653 356 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 RAD54LQ92698 747 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 NIFKQ9BYG3 293 aaKnown RBP19.21■□□□□ 0.67
SKP2-201ENST00000274254 NRBP2Q9NSY0 501 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 LOXHD1Q8IVV2 1947 aa19.21■□□□□ 0.67
SKP2-201ENST00000274254 TMEM150BA6NC51 233 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 HBP1O60381 514 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 CABYRO75952 493 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 SLFN14P0C7P3 912 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 PTMSP20962 102 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 RARRES1P49788 294 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 PSEN2P49810 448 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 KIAA0753Q2KHM9 967 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 LONRF3Q496Y0 759 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 OTUD6AQ7L8S5 288 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 TRMT1LQ7Z2T5 733 aaKnown RBP19.2■□□□□ 0.66
SKP2-201ENST00000274254 LARP4BQ92615 738 aaKnown RBP19.2■□□□□ 0.66
SKP2-201ENST00000274254 BHMT2Q9H2M3 363 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 SEPT9Q9UHD8 586 aaPredicted RBP19.2■□□□□ 0.66
SKP2-201ENST00000274254 PHF24Q9UPV7 400 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 ZBTB42B2RXF5 422 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 KBTBD13C9JR72 458 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 MNX1P50219 401 aaPredicted RBP19.2■□□□□ 0.66
SKP2-201ENST00000274254 SLC12A3P55017 1021 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 TARBP2Q15633 366 aaKnown RBP19.2■□□□□ 0.66
SKP2-201ENST00000274254 PLA2G4FQ68DD2 849 aa19.2■□□□□ 0.66
SKP2-201ENST00000274254 SYT2Q8N9I0 419 aaPredicted RBP19.2■□□□□ 0.66
SKP2-201ENST00000274254 CEP89Q96ST8 783 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms