RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 DNAJC17Q9NVM6 304 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 KPNA7A9QM74 516 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ENC1O14682 589 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 DDX5P17844 614 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ARHGDIAP52565 204 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 BASP1P80723 227 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 NAA35Q5VZE5 725 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 PI4K2BQ8TCG2 481 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 APOBEC2Q9Y235 224 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ARHGEF40Q8TER5 1519 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 EIF4E1BA6NMX2 242 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ZRANB2O95218 330 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 SLC4A1P02730 911 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 LRRC47Q8N1G4 583 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CHMP6Q96FZ7 201 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 KIF2CQ99661 725 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 UBE2TQ9NPD8 197 aaPredicted RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 SRPRBQ9Y5M8 271 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 GGPS1O95749 300 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 JAK3P52333 1124 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 YWHAHQ04917 246 aaPredicted RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ZNF579Q8NAF0 562 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 HINFPQ9BQA5 517 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 KANSL2Q9H9L4 492 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 PPME1Q9Y570 386 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 STK36Q9NRP7 1315 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 HSPA4LO95757 839 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 SERPINB2P05120 415 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 CUL4AQ13619 759 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 KRT31Q15323 416 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 SESTD1Q86VW0 696 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 DCLK2Q8N568 766 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 TTC39CQ8N584 583 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 KIF17Q9P2E2 1029 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PAPOLAP51003 745 aaKnown RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 E2F5Q15329 346 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 C4orf50Q6ZRC1 276 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 KIF9Q9HAQ2 790 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 SYF2O95926 243 aaKnown RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 CA4P22748 312 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 MTRQ99707 1265 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 L3MBTL1Q9Y468 752 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 NDUFB9Q9Y6M9 179 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 LGALS16A8MUM7 142 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 EIF3DO15371 548 aaKnown RBP eCLIP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 NCF2P19878 526 aaPredicted RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 MAP3K7CLP57077 242 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 FLOT2Q14254 428 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PTPROQ16827 1216 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ICE2Q659A1 982 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ING2Q9H160 280 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 LIFRP42702 1097 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ARMCX2Q7L311 632 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PAGE5Q96GU1 130 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 LEMD3Q9Y2U8 911 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 SYNJ2BP-COX16A0A087WUM0 186 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 FGGP02679 453 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PSMA2P25787 234 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 DHX36Q9H2U1 1008 aaKnown RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 COX16Q9P0S2 106 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 CAMSAP1Q5T5Y3 1602 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 CHUKO15111 745 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 STAT2P52630 851 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 OCRLQ01968 901 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 SLC8A2Q9UPR5 921 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ZNF804BA4D1E1 1349 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PNMA6FA0A0J9YX94 578 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 GYG2O15488 501 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 MAFGO15525 162 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 ZFXP17010 805 aaPredicted RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PLCG1P19174 1290 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 NEK2P51955 445 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 NBPF20Q3BBV1 942 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 LGR6Q9HBX8 967 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 CEP152O94986 1710 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 GOLGA8MH3BSY2 632 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 COPEO14579 308 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 KRT4P19013 534 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 PCYT1AP49585 367 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 KCTD2Q14681 263 aa8.55□□□□□ -1.04
LIMD1-201ENST00000273317 RARS2Q5T160 578 aaKnown RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 EAF2Q96CJ1 260 aaPredicted RBP8.55□□□□□ -1.04
LIMD1-201ENST00000273317 EFCAB14O75071 495 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 TRMT10CQ7L0Y3 403 aaKnown RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MAGEB5Q9BZ81 275 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 A0A1B0GW55 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms