RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 HAS1Q92839 578 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 RPGRIP1Q96KN7 1286 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 CCDC114Q96M63 670 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 LXNQ9BS40 222 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 SNX12Q9UMY4 172 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 FAM86B1E9PN63 330 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 MSH4O15457 936 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 PLCB3Q01970 1234 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 LDHDQ86WU2 507 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 SAAL1Q96ER3 474 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 DNAJC7Q99615 494 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 METTL14Q9HCE5 456 aaKnown RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 PICK1Q9NRD5 415 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 TMEM150BA6NC51 233 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 LRRIQ3A6PVS8 624 aaPredicted RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 SLC16A4O15374 487 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 NEFHP12036 1026 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 COPB2P35606 906 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 SMTNP53814 917 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 PPP1R7Q15435 360 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 KRT71Q3SY84 523 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 STRIP1Q5VSL9 837 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 FAM71BQ8TC56 605 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 SCFD1Q8WVM8 642 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 PAGR1Q9BTK6 254 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 DNAJC17Q9NVM6 304 aaKnown RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 FZD1Q9UP38 647 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 VGLL3A8MV65 326 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 SPP2Q13103 211 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 RSRC2Q7L4I2 434 aaKnown RBP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 DDX42Q86XP3 938 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBXN4-201ENST00000272638 NACC1Q96RE7 527 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
UBXN4-201ENST00000272638 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 CTNNA1P35221 906 aaKnown RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 MAP2K1Q02750 393 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 PTK2Q05397 1052 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 AP3B2Q13367 1082 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 BEND6Q5SZJ8 279 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 POMGNT1Q8WZA1 660 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 PDE2AO00408 941 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 ZBED4O75132 1171 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 USP11P51784 963 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 COG2Q14746 738 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 CCDC105Q8IYK2 499 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 SUPT20HQ8NEM7 779 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 ERGIC2Q96RQ1 377 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 STIM2Q9P246 746 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 IVLP07476 585 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 DRAP1Q14919 205 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-201ENST00000272638 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
UBXN4-201ENST00000272638 PSMD14O00487 310 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 BCRP11274 1271 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 UCHL3P15374 230 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 CTNNA2P26232 953 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 PDCLQ13371 301 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 DGKZQ13574 1117 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 KIFC3Q9BVG8 833 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 BUB1BO60566 1050 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-201ENST00000272638 PBX1P40424 430 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
UBXN4-201ENST00000272638 SNX1Q13596 522 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 CEP55Q53EZ4 464 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 CAPN12Q6ZSI9 719 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 CCDC26Q8TAB7 109 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 MTMR9Q96QG7 549 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 EML1O00423 815 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 ARP10275 920 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 NPEPPSP55786 919 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 GSTA5Q7RTV2 222 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 PROM2Q8N271 834 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 NYAP2Q9P242 653 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 ATP8A1Q9Y2Q0 1164 aa13.66□□□□□ -0.22
UBXN4-201ENST00000272638 UTP11Q9Y3A2 253 aaKnown RBP13.66□□□□□ -0.22
UBXN4-201ENST00000272638 LRRIQ4A6NIV6 560 aa13.65□□□□□ -0.22
UBXN4-201ENST00000272638 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
UBXN4-201ENST00000272638 FGGP02679 453 aa13.65□□□□□ -0.22
UBXN4-201ENST00000272638 RXRBP28702 533 aa13.65□□□□□ -0.22
UBXN4-201ENST00000272638 MIIPQ5JXC2 388 aa13.65□□□□□ -0.22
UBXN4-201ENST00000272638 ZNF507Q8TCN5 953 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms