RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 A0A087WUV0 522 aaPredicted RBP24.24■■□□□ 1.47
CDR2-201ENST00000268383 GCFC2P16383 781 aaKnown RBP24.24■■□□□ 1.47
CDR2-201ENST00000268383 KSR1Q8IVT5 923 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 DNAJC18Q9H819 358 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 PCDHB13Q9Y5F0 798 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 MEIS2O14770 477 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 SPATA31C1P0DKV0 1188 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 NR1D1P20393 614 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 ECHS1P30084 290 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 SPIRE1Q08AE8 756 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 CDC42EP5Q6NZY7 148 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 METTL13Q8N6R0 699 aa24.24■■□□□ 1.47
CDR2-201ENST00000268383 LSP1P33241 339 aa24.23■■□□□ 1.47
CDR2-201ENST00000268383 GPATCH4Q5T3I0 446 aaKnown RBP24.23■■□□□ 1.47
CDR2-201ENST00000268383 FAM86B1E9PN63 330 aa24.23■■□□□ 1.47
CDR2-201ENST00000268383 AFPP02771 609 aaKnown RBP24.23■■□□□ 1.47
CDR2-201ENST00000268383 FAM86B2P0C5J1 330 aa24.23■■□□□ 1.47
CDR2-201ENST00000268383 EEF2P13639 858 aaKnown RBP24.23■■□□□ 1.47
CDR2-201ENST00000268383 ARHGAP4P98171 946 aa24.23■■□□□ 1.47
CDR2-201ENST00000268383 KNOP1Q1ED39 458 aaKnown RBP24.23■■□□□ 1.47
CDR2-201ENST00000268383 KCNQ5Q9NR82 932 aa24.23■■□□□ 1.47
CDR2-201ENST00000268383 ERLIN2O94905 339 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 GYS1P13807 737 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 HOXA13P31271 388 aaPredicted RBP24.22■■□□□ 1.47
CDR2-201ENST00000268383 TNNC1P63316 161 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 FOXR2Q6PJQ5 311 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 RUSC1Q9BVN2 902 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 BHMT2Q9H2M3 363 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 LRRC4CQ9HCJ2 640 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 RGL1Q9NZL6 768 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 TMEM59LQ9UK28 342 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 FRMD3A2A2Y4 597 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 XRCC5P13010 732 aaKnown RBP24.22■■□□□ 1.47
CDR2-201ENST00000268383 NAA35Q5VZE5 725 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 LRRC57Q8N9N7 239 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 CELF4Q9BZC1 486 aaKnown RBP24.22■■□□□ 1.47
CDR2-201ENST00000268383 AMACRQ9UHK6 382 aa24.22■■□□□ 1.47
CDR2-201ENST00000268383 ZBTB39O15060 712 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 USP11P51784 963 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 UAP1Q16222 522 aaPredicted RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 EDRF1Q3B7T1 1238 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 ETNPPLQ8TBG4 499 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 TAF1DQ9H5J8 278 aaPredicted RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 NOC2LQ9Y3T9 749 aaKnown RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 FOCADQ5VW36 1801 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 BACH1O14867 736 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 SART1O43290 800 aaKnown RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 GFPT2O94808 682 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 GCNT3O95395 438 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 HSD17B3P37058 310 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 ADAT2Q7Z6V5 191 aaKnown RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 ZC3H3Q8IXZ2 948 aaKnown RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 PIGOQ8TEQ8 1089 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 U2AF1L4Q8WU68 220 aaKnown RBP24.21■■□□□ 1.47
CDR2-201ENST00000268383 BCCIPQ9P287 314 aaKnown RBP eCLIP24.21■■□□□ 1.47
CDR2-201ENST00000268383 BCS1LQ9Y276 419 aa24.21■■□□□ 1.47
CDR2-201ENST00000268383 KDM7AQ6ZMT4 941 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 ARHGAP27Q6ZUM4 889 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 TPCN2Q8NHX9 752 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 ATP6V1G3Q96LB4 118 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 SIX2Q9NPC8 291 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 GCNT4Q9P109 453 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 DNM3Q9UQ16 869 aa24.2■■□□□ 1.47
CDR2-201ENST00000268383 COPB2P35606 906 aa24.2■■□□□ 1.46
CDR2-201ENST00000268383 EPHA7Q15375 998 aa24.2■■□□□ 1.46
CDR2-201ENST00000268383 CERKQ8TCT0 537 aa24.2■■□□□ 1.46
CDR2-201ENST00000268383 TRIM31Q9BZY9 425 aa24.2■■□□□ 1.46
CDR2-201ENST00000268383 OSGEPQ9NPF4 335 aa24.2■■□□□ 1.46
CDR2-201ENST00000268383 ASTN1O14525 1302 aa24.2■■□□□ 1.46
CDR2-201ENST00000268383 NR3C1P04150 777 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 LENG9Q96B70 501 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 NR2E1Q9Y466 385 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 TAF1LQ8IZX4 1826 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 DDX3XO00571 662 aaKnown RBP eCLIP24.19■■□□□ 1.461e-7■■■□□ 17.5
CDR2-201ENST00000268383 DAPK3O43293 454 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 IKQ13123 557 aaPredicted RBP24.19■■□□□ 1.46
CDR2-201ENST00000268383 VPS72Q15906 364 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 ZC2HC1CQ53FD0 456 aaPredicted RBP24.19■■□□□ 1.46
CDR2-201ENST00000268383 SLFN13Q68D06 897 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 MREGQ8N565 214 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 WHAMMQ8TF30 809 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 SCFD2Q8WU76 684 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 PPANQ9NQ55 473 aaKnown RBP24.19■■□□□ 1.46
CDR2-201ENST00000268383 EML1O00423 815 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 INPP5BP32019 993 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 HDLBPQ00341 1268 aaKnown RBP24.19■■□□□ 1.46
CDR2-201ENST00000268383 DDR1Q08345 913 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 COG2Q14746 738 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 PEX26Q7Z412 305 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 DAAM2Q86T65 1068 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 SLC35C1Q96A29 364 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 ISCUQ9H1K1 167 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 TRAF3IP3Q9Y228 551 aa24.19■■□□□ 1.46
CDR2-201ENST00000268383 KRIT1O00522 736 aa24.18■■□□□ 1.46
CDR2-201ENST00000268383 BBOX1O75936 387 aa24.18■■□□□ 1.46
CDR2-201ENST00000268383 GDF11O95390 407 aa24.18■■□□□ 1.46
CDR2-201ENST00000268383 APOBEC3HQ6NTF7 200 aaKnown RBP24.18■■□□□ 1.46
CDR2-201ENST00000268383 FRMD5Q7Z6J6 570 aa24.18■■□□□ 1.46
CDR2-201ENST00000268383 DPH5Q9H2P9 285 aa24.18■■□□□ 1.46
CDR2-201ENST00000268383 EFCC1Q9HA90 598 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms