RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 OPHN1O60890 802 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 GCNT3O95395 438 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 TXNP10599 105 aaKnown RBP8.48□□□□□ -1.05
USP3-201ENST00000268049 SYKP43405 635 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 ZNF697Q5TEC3 545 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 FYB2Q5VWT5 728 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 CTU1Q7Z7A3 348 aaKnown RBP8.48□□□□□ -1.05
USP3-201ENST00000268049 HAUS1Q96CS2 278 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
USP3-201ENST00000268049 NUF2Q9BZD4 464 aa8.48□□□□□ -1.05
USP3-201ENST00000268049 V9GY48 417 aaPredicted RBP8.48□□□□□ -1.05
USP3-201ENST00000268049 KDM1AO60341 852 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 DNAJC8O75937 253 aaPredicted RBP8.47□□□□□ -1.05
USP3-201ENST00000268049 RPS6KB1P23443 525 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 ZNF131P52739 623 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 PRPSAP1Q14558 356 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 CCDC157Q569K6 752 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 LCORLQ8N3X6 602 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 MRPS27Q92552 414 aaKnown RBP8.47□□□□□ -1.05
USP3-201ENST00000268049 ANKFY1Q9P2R3 1169 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 E7EWF7 191 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 XYLBO75191 536 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 HNRNPH2P55795 449 aaKnown RBP8.47□□□□□ -1.05
USP3-201ENST00000268049 ARHGAP4P98171 946 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 CREMQ03060 361 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 HSP90AA4PQ58FG1 418 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 SLFN12LQ6IEE8 588 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 SLAIN1Q8ND83 568 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 STKLD1Q8NE28 680 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 SH3GL3Q99963 347 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 C1orf112Q9NSG2 853 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 HPCAL4Q9UM19 191 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 DISP2A7MBM2 1401 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 C17orf102A2RUQ5 167 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 MYO1CO00159 1063 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 RANBP1P43487 201 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 BFSP1Q12934 665 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 RAB30Q15771 203 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 HSP90AA5PQ58FG0 334 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 HHIPL2Q6UWX4 724 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 LRRC43Q8N309 656 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 CAMKK2Q96RR4 588 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 TSC22D3Q99576 134 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 ANAPC5Q9UJX4 755 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 ATRNO75882 1429 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 SLIT3O75094 1523 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 SYNGAP1Q96PV0 1343 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 GLTPD2A6NH11 291 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 PRR29P0C7W0 189 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 NT5DC4Q86YG4 428 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 USP26Q9BXU7 913 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 ZC4H2Q9NQZ6 224 aa8.47□□□□□ -1.05
USP3-201ENST00000268049 MROH7-TTC4A0A0A0MT08 1334 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 RPS6KA5O75582 802 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 MAGEA9P43362 315 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 RASSF2P50749 326 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 AK2P54819 239 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 POLE2P56282 527 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 KRT76Q01546 638 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 DNM1Q05193 864 aaKnown RBP8.46□□□□□ -1.05
USP3-201ENST00000268049 DDR1Q08345 913 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 PIK3AP1Q6ZUJ8 805 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 SH3RF3Q8TEJ3 882 aaPredicted RBP8.46□□□□□ -1.05
USP3-201ENST00000268049 TTC25Q96NG3 672 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 CAPS2Q9BXY5 557 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 TBC1D22BQ9NU19 505 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 ELP1O95163 1332 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 GMNNO75496 209 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 S100BP04271 92 aaPredicted RBP8.46□□□□□ -1.05
USP3-201ENST00000268049 CCT5P48643 541 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 EPHB1P54762 984 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 MLLT1Q03111 559 aaPredicted RBP8.46□□□□□ -1.05
USP3-201ENST00000268049 TMED1Q13445 227 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 ERCC6LQ2NKX8 1250 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 C8orf74Q6P047 294 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.05
USP3-201ENST00000268049 FAM71BQ8TC56 605 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 RMDN3Q96TC7 470 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 RAVER2Q9HCJ3 691 aaKnown RBP8.46□□□□□ -1.05
USP3-201ENST00000268049 MED4Q9NPJ6 270 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 COL4A3BPQ9Y5P4 624 aa8.46□□□□□ -1.05
USP3-201ENST00000268049 TRAF5O00463 557 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 MAGEB2O15479 319 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 RNASEH1O60930 286 aaKnown RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 DRP2Q13474 957 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 TMCO4Q5TGY1 634 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 VPS52Q8N1B4 723 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 TRPV6Q9H1D0 765 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 ST7Q9NRC1 585 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 DDX25Q9UHL0 483 aaKnown RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 MRPS17Q9Y2R5 130 aaKnown RBP8.46□□□□□ -1.06
USP3-201ENST00000268049 SLIT2O94813 1529 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 PRKAB2O43741 272 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 HUS1O60921 280 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 CLTAP09496 248 aa8.46□□□□□ -1.06
USP3-201ENST00000268049 TNFAIP3P21580 790 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms