RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 MYBL1P10243 752 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 HSD17B3P37058 310 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 SFR1Q86XK3 245 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 PPFIBP2Q8ND30 876 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 SH2D3AQ9BRG2 576 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 SYNCQ9H7C4 482 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 UBE2TQ9NPD8 197 aaPredicted RBP18.54■□□□□ 0.56
SRF-201ENST00000265354 TMEM94Q12767 1356 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 SRRM1Q8IYB3 904 aaKnown RBP18.54■□□□□ 0.56
SRF-201ENST00000265354 GUF1Q8N442 669 aaKnown RBP18.54■□□□□ 0.56
SRF-201ENST00000265354 PRMT1Q99873 361 aaKnown RBP18.54■□□□□ 0.56
SRF-201ENST00000265354 HEMGNQ9BXL5 484 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 CCSER1Q9C0I3 900 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
SRF-201ENST00000265354 GAS8O95995 478 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 TRIM49P0CI25 452 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 TRIM49CP0CI26 452 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 GBP1P32455 592 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 C6orf163Q5TEZ5 329 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.53■□□□□ 0.56
SRF-201ENST00000265354 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 USP40Q9NVE5 1235 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 CYP19A1P11511 503 aaPredicted RBP18.53■□□□□ 0.56
SRF-201ENST00000265354 ATP5DP30049 168 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 KCNJ1P48048 391 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 RIMS1Q86UR5 1692 aaKnown RBP18.53■□□□□ 0.56
SRF-201ENST00000265354 DIAPH2O60879 1101 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 PFDN1O60925 122 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 FAM107AO95990 144 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 PCP11498 1178 aaKnown RBP18.53■□□□□ 0.56
SRF-201ENST00000265354 KLRK1P26718 216 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 PTK2Q05397 1052 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 CTTNQ14247 550 aaKnown RBP18.53■□□□□ 0.56
SRF-201ENST00000265354 SLC18A3Q16572 532 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 RNF168Q8IYW5 571 aaPredicted RBP18.53■□□□□ 0.56
SRF-201ENST00000265354 SEMA6BQ9H3T3 888 aa18.53■□□□□ 0.56
SRF-201ENST00000265354 CHN1P15882 459 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 MTM1Q13496 603 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 TMED2Q15363 201 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 DOK7Q18PE1 504 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.52■□□□□ 0.561e-6■■□□□ 11.6
SRF-201ENST00000265354 BAG2O95816 211 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 CACNB3P54284 484 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 TTMPQ5BVD1 217 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 SCYL3Q8IZE3 742 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 ANKS1AQ92625 1134 aa18.52■□□□□ 0.56
SRF-201ENST00000265354 DDX23Q9BUQ8 820 aaKnown RBP18.52■□□□□ 0.56
SRF-201ENST00000265354 PNPLA7Q6ZV29 1317 aa18.52■□□□□ 0.55
SRF-201ENST00000265354 GLIS3Q8NEA6 775 aa18.52■□□□□ 0.55
SRF-201ENST00000265354 HOOK2Q96ED9 719 aa18.52■□□□□ 0.55
SRF-201ENST00000265354 TLR10Q9BXR5 811 aa18.52■□□□□ 0.55
SRF-201ENST00000265354 TRIM4Q9C037 500 aa18.52■□□□□ 0.55
SRF-201ENST00000265354 RABGAP1Q9Y3P9 1069 aa18.52■□□□□ 0.55
SRF-201ENST00000265354 BZW2Q9Y6E2 419 aaKnown RBP18.52■□□□□ 0.55
SRF-201ENST00000265354 RAD54LQ92698 747 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 GOLGA8IPA6NC78 632 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 GOLGA8JA6NMD2 632 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 ITGA4P13612 1032 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 SEC23AQ15436 765 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 CDC37Q16543 378 aaPredicted RBP18.51■□□□□ 0.55
SRF-201ENST00000265354 ANKRD20A3Q5VUR7 823 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 GGA1Q9UJY5 639 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.51■□□□□ 0.55
SRF-201ENST00000265354 KDM3AQ9Y4C1 1321 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 GAS7O60861 476 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 SLC20A2Q08357 652 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 SGO2Q562F6 1265 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 MIPOL1Q8TD10 442 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
SRF-201ENST00000265354 TXNDC9O14530 226 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 PMS2P54278 862 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 LRRC23Q53EV4 343 aaPredicted RBP18.5■□□□□ 0.55
SRF-201ENST00000265354 CYB5D1Q6P9G0 228 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 RFX8Q6ZV50 586 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 DUSP9Q99956 384 aaKnown RBP18.5■□□□□ 0.55
SRF-201ENST00000265354 FERP16591 822 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 TSNAXIP1Q2TAA8 658 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 TTBK2Q6IQ55 1244 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
SRF-201ENST00000265354 ZNF653Q96CK0 615 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 SMC6Q96SB8 1091 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 METTL14Q9HCE5 456 aaKnown RBP18.5■□□□□ 0.55
SRF-201ENST00000265354 DONSONQ9NYP3 566 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 ZNF148Q9UQR1 794 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 AMPD2Q01433 879 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 KIAA0825Q8IV33 1275 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 ZNF513Q8N8E2 541 aaPredicted RBP18.5■□□□□ 0.55
SRF-201ENST00000265354 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 FAM118BQ9BPY3 351 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 USP38Q8NB14 1042 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 ETNK1Q9HBU6 452 aa18.5■□□□□ 0.55
SRF-201ENST00000265354 CCDC188H7C350 402 aa18.49■□□□□ 0.55
SRF-201ENST00000265354 K7ENM7 598 aa18.49■□□□□ 0.55
SRF-201ENST00000265354 TRIM37O94972 964 aa18.49■□□□□ 0.55
SRF-201ENST00000265354 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
SRF-201ENST00000265354 PASKQ96RG2 1323 aa18.49■□□□□ 0.55
SRF-201ENST00000265354 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms