RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 ATP8B4Q8TF62 1192 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 PPM1EQ8WY54 764 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 TOP1MTQ969P6 601 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 FAM49AQ9H0Q0 323 aaPredicted RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 INSL6Q9Y581 213 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 PCDHA10Q9Y5I2 948 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 MAFBQ9Y5Q3 323 aaPredicted RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 PRRC2BQ5JSZ5 2229 aaKnown RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 SMIM35A0A1B0GVV1 85 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.21■□□□□ 0.51
USE1-201ENST00000263897 EPOPA6NHQ4 379 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 PSAPP07602 524 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 GHRP10912 638 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 KLRC1P26715 233 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 MRPS6P82932 125 aaKnown RBP18.21■□□□□ 0.51
USE1-201ENST00000263897 LPIN1Q14693 890 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 ZNF484Q5JVG2 852 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 IER5Q5VY09 327 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 MTHFD1LQ6UB35 978 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 NME8Q8N427 588 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 RIT2Q99578 217 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 CHD7Q9P2D1 2997 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.51
USE1-201ENST00000263897 CYP3A7-CYP3A51PA0A087WV96 503 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 CTDNEP1O95476 244 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 CYP3A7P24462 503 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 HTRA4P83105 476 aaPredicted RBP18.2■□□□□ 0.5
USE1-201ENST00000263897 CCDC85BQ15834 202 aaPredicted RBP18.2■□□□□ 0.5
USE1-201ENST00000263897 Q4G0T1 1027 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 SPRED2Q7Z698 418 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 SLC5A5Q92911 643 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 PHF20Q9BVI0 1012 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 KCNJ14Q9UNX9 436 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 STK36Q9NRP7 1315 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 EVPLQ92817 2033 aa18.2■□□□□ 0.5
USE1-201ENST00000263897 COL1A2P08123 1366 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 LINC01553A4QN01 128 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 NEK4P51957 841 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 ERVK-21P61565 698 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 NONOQ15233 471 aaKnown RBP eCLIP18.19■□□□□ 0.5
USE1-201ENST00000263897 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 BBXQ8WY36 941 aaPredicted RBP18.19■□□□□ 0.5
USE1-201ENST00000263897 CELF4Q9BZC1 486 aaKnown RBP18.19■□□□□ 0.5
USE1-201ENST00000263897 GABBR1Q9UBS5 961 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 SAMM50Q9Y512 469 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 MTCH2Q9Y6C9 303 aa18.19■□□□□ 0.5
USE1-201ENST00000263897 WDR64B1ANS9 1081 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 ZBTB42B2RXF5 422 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 ENPP3O14638 875 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 DTNBO60941 627 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 UPP2O95045 317 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 XBP1P17861 261 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 ME3Q16798 604 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 MOXD1Q6UVY6 613 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 KRT25Q7Z3Z0 450 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 KIAA0319LQ8IZA0 1049 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 TGS1Q96RS0 853 aaKnown RBP18.18■□□□□ 0.5
USE1-201ENST00000263897 AGO3Q9H9G7 860 aaKnown RBP18.18■□□□□ 0.5
USE1-201ENST00000263897 PRDM6Q9NQX0 595 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 DISC1Q9NRI5 854 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 ORC3Q9UBD5 711 aaPredicted RBP18.18■□□□□ 0.5
USE1-201ENST00000263897 TRPV2Q9Y5S1 764 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 SIP14410 1827 aa18.18■□□□□ 0.5
USE1-201ENST00000263897 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 TRANK1O15050 2925 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 M0QZ92 97 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 GTPBP6O43824 516 aaPredicted RBP18.17■□□□□ 0.5
USE1-201ENST00000263897 LPXNO60711 386 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 GAS7O60861 476 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 PSMD10O75832 226 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 TDP2O95551 362 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
USE1-201ENST00000263897 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 GRB10Q13322 594 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 INF2Q27J81 1249 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 LRCH2Q5VUJ6 765 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 SP7Q8TDD2 431 aaPredicted RBP18.17■□□□□ 0.5
USE1-201ENST00000263897 GJA10Q969M2 543 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 GJB4Q9NTQ9 266 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 KDM3AQ9Y4C1 1321 aa18.17■□□□□ 0.5
USE1-201ENST00000263897 CD52P31358 61 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 SFNP31947 248 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 TRMT1LQ7Z2T5 733 aaKnown RBP18.16■□□□□ 0.5
USE1-201ENST00000263897 WASF1Q92558 559 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 COL25A1Q9BXS0 654 aaPredicted RBP18.16■□□□□ 0.5
USE1-201ENST00000263897 UNC45AQ9H3U1 944 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 SUGCTQ9HAC7 445 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 NRBP2Q9NSY0 501 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms