RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 AJAP1Q9UKB5 411 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 HMGB1P1B2RPK0 211 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 TM4SF1P30408 202 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 GRAPQ13588 217 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 GRAPLQ8TC17 118 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 NAGPAQ9UK23 515 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 PNMA6FA0A0J9YX94 578 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 PHF20L1A8MW92 1017 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 CPP00450 1065 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 FGGP02679 453 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 PPP4CP60510 307 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 VPS36Q86VN1 386 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 LRRC45Q96CN5 670 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 CYFIP2Q96F07 1278 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 FLOT1O75955 427 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 GNA14O95837 355 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 H2AFZP0C0S5 128 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 ZNF76P36508 570 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 QPCTQ16769 361 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 H2AFVQ71UI9 128 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.24
CHMP3-201ENST00000263856 RUBCNQ92622 972 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 CEP63Q96MT8 703 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 ISCUQ9H1K1 167 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 GANQ9H2C0 597 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 TMBIM4Q9HC24 238 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 LRRC4CQ9HCJ2 640 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 LEMD3Q9Y2U8 911 aa13.52□□□□□ -0.24
CHMP3-201ENST00000263856 LRRN2O75325 713 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 ABCB11O95342 1321 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 UAP1Q16222 522 aaPredicted RBP13.52□□□□□ -0.25
CHMP3-201ENST00000263856 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 PIGOQ8TEQ8 1089 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.25
CHMP3-201ENST00000263856 ROBO3Q96MS0 1386 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 G3V3G9 751 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 RBAK-RBAKDNI3L0D1 243 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 AKAP3O75969 853 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TTLL1O95922 423 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TNFRSF8P28908 595 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 USP11P51784 963 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 ZNF844Q08AG5 666 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 IFI16Q16666 785 aaKnown RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 MAEAQ7L5Y9 396 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 ARFGAP2Q8N6H7 521 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 PLCG2P16885 1265 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 PON1P27169 355 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 CYP2J2P51589 502 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 RHBDL3P58872 404 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 DHX36Q9H2U1 1008 aaKnown RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 UTP11Q9Y3A2 253 aaKnown RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 SLCO1A2P46721 670 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 UBXN2AP68543 259 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TBC1D10BQ4KMP7 808 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 CCDC13Q8IYE1 715 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 CNOT8Q9UFF9 292 aaKnown RBP13.51□□□□□ -0.25
CHMP3-201ENST00000263856 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 NR2E1Q9Y466 385 aa13.51□□□□□ -0.25
CHMP3-201ENST00000263856 GMNCA6NCL1 334 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 FAM107AO95990 144 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
CHMP3-201ENST00000263856 E2F5Q15329 346 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 QRICH1Q2TAL8 776 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 ARSHQ5FYA8 562 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 CATSPER3Q86XQ3 398 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 GLG1Q92896 1179 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 RGL1Q9NZL6 768 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 NAV1Q8NEY1 1877 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 SPDYE3A6NKU9 549 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 ZBTB5O15062 677 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
CHMP3-201ENST00000263856 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms