RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 IRF2BP2Q7Z5L9 587 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF384Q8TF68 577 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TBC1D31Q96DN5 1066 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 INTS9Q9NV88 658 aaKnown RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 AMFRQ9UKV5 643 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ATP8A1Q9Y2Q0 1164 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 C15orf41Q9Y2V0 281 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 CLTAP09496 248 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 ADCY2Q08462 1091 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 C12orf60Q5U649 245 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 PNMA8AQ86V59 439 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 NSMCE1Q8WV22 266 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 TCP11Q8WWU5 503 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 SELENOSQ9BQE4 189 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 PABPC3Q9H361 631 aaKnown RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 CNOT7Q9UIV1 285 aaKnown RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 RASAL2Q9UJF2 1139 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 BACH1O14867 736 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 RGS16O15492 202 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 CAND2O75155 1236 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 ZBTB48P10074 688 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF131P52739 623 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 PMS2P54278 862 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 DRG2P55039 364 aaKnown RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 MDM1Q8TC05 714 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
CHMP2B-201ENST00000263780 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 SLC26A4O43511 780 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 ANP32DO95626 131 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 CCND1P24385 295 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 PDE6CP51160 858 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 DHX34Q14147 1143 aaKnown RBP13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 SLC35G1Q2M3R5 365 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 SPTY2D1Q68D10 685 aaPredicted RBP13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 TAOK1Q7L7X3 1001 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 ZC3H3Q8IXZ2 948 aaKnown RBP13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 HES6Q96HZ4 224 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 DPH5Q9H2P9 285 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 PARP2Q9UGN5 583 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 A0A1B0GUL6 1792 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 PTENP60484 403 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 ADAM9Q13443 819 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 ATXN2LQ8WWM7 1075 aaKnown RBP13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 DNAJC19Q96DA6 116 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 ANKRD27Q96NW4 1050 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 ERP44Q9BS26 406 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
CHMP2B-201ENST00000263780 AFF2P51816 1311 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 LIN7AO14910 233 aaPredicted RBP13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 ITGA4P13612 1032 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 ALADP13716 330 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 NQO1P15559 274 aaKnown RBP13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 DR1Q01658 176 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 EVX2Q03828 476 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 DUPD1Q68J44 220 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 EP400NLQ6ZTU2 488 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 FRMD5Q7Z6J6 570 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 TBC1D1Q86TI0 1168 aaPredicted RBP13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 NT5DC3Q86UY8 548 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 STAMBPL1Q96FJ0 436 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 ELAC2Q9BQ52 826 aaKnown RBP13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 LAMB1P07942 1786 aa13.46□□□□□ -0.25
CHMP2B-201ENST00000263780 UCHL3P15374 230 aa13.46□□□□□ -0.26
CHMP2B-201ENST00000263780 LMNB2Q03252 620 aa13.46□□□□□ -0.26
CHMP2B-201ENST00000263780 LRRC34Q8IZ02 419 aa13.46□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.26
CHMP2B-201ENST00000263780 GOPCQ9HD26 462 aa13.46□□□□□ -0.26
CHMP2B-201ENST00000263780 TOGARAM1Q9Y4F4 1720 aa13.46□□□□□ -0.26
CHMP2B-201ENST00000263780 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 NTSR2O95665 410 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 HSPA6P17066 643 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms