RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 KCTD10Q9H3F6 313 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 SSU72P8A0A1W2PR75 194 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 E7EVH7 732 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 H0YHG0 523 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 MYO1FO00160 1098 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 PJA2O43164 708 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 DAPK3O43293 454 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 ERLIN2O94905 339 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 NMT1P30419 496 aaKnown RBP9.99□□□□□ -0.81
MSH4-201ENST00000263187 ZNF76P36508 570 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 PAK2Q13177 524 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 SEPT2Q15019 361 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 CDC37Q16543 378 aaPredicted RBP9.99□□□□□ -0.81
MSH4-201ENST00000263187 ARHGAP44Q17R89 818 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 PPM1EQ8WY54 764 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 RUSC1Q9BVN2 902 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 DHX36Q9H2U1 1008 aaKnown RBP9.99□□□□□ -0.81
MSH4-201ENST00000263187 NR2E1Q9Y466 385 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 PCDHA2Q9Y5H9 948 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 CAPN7Q9Y6W3 813 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 QSER1Q2KHR3 1735 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 ESYT2A0FGR8 921 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 TMEM110-MUSTN1A8MSY1 372 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 DCDC2CA8MYV0 355 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 FAM86B1E9PN63 330 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 KRIT1O00522 736 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 LRRN2O75325 713 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 FAM86B2P0C5J1 330 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
MSH4-201ENST00000263187 PRLRP16471 622 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 NR1D1P20393 614 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 HOXD13P35453 343 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 CYP2J2P51589 502 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 AADACL2Q6P093 401 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 GLYCTKQ8IVS8 523 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 TPH2Q8IWU9 490 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 USP38Q8NB14 1042 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 GCNT4Q9P109 453 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 CCDC88AQ3V6T2 1871 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 TTI1O43156 1089 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 TRIM49P0CI25 452 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 TRIM49CP0CI26 452 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 ATP2B4P23634 1241 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 PON1P27169 355 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 HDLBPQ00341 1268 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 PSMD2Q13200 908 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 PPP4R3AQ6IN85 833 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 CDC42EP5Q6NZY7 148 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 PEX26Q7Z412 305 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 IRF2BP2Q7Z5L9 587 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 METTL13Q8N6R0 699 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 INPP4AQ96PE3 977 aaPredicted RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 SH3GL2Q99962 352 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 TRIM51Q9BSJ1 452 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 GANQ9H2C0 597 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 LAMB1P07942 1786 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 MYH1P12882 1939 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 SART1O43290 800 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 SHOX2O60902 331 aaPredicted RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 IL1R1P14778 569 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 INPP5BP32019 993 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 LSP1P33241 339 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 CTNNA1P35221 906 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 ARHGAP4P98171 946 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 IFT88Q13099 833 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 GIT2Q14161 759 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 SLFN13Q68D06 897 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 IQCKQ8N0W5 287 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 RNF10Q8N5U6 811 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 ZC3H12CQ9C0D7 883 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 LUC7LQ9NQ29 371 aaKnown RBP9.98□□□□□ -0.81
MSH4-201ENST00000263187 GDF3Q9NR23 364 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 NAGPAQ9UK23 515 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 DNM3Q9UQ16 869 aa9.98□□□□□ -0.81
MSH4-201ENST00000263187 DDX39AO00148 427 aaKnown RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 KIF4AO95239 1232 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 GTF2A1P52655 376 aaPredicted RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 SLC12A3P55017 1021 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 ALS2CLQ60I27 953 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 PROM2Q8N271 834 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 RBM17Q96I25 401 aaKnown RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 LRRC27Q9C0I9 530 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 NT5C3AQ9H0P0 336 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 NOC2LQ9Y3T9 749 aaKnown RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 DDX60LQ5H9U9 1706 aaKnown RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 DDTLA6NHG4 134 aaPredicted RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 EML1O00423 815 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 AFPP02771 609 aaKnown RBP9.97□□□□□ -0.81
MSH4-201ENST00000263187 HSD17B3P37058 310 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 USP8P40818 1118 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 GABPAQ06546 454 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 MYCT1Q8N699 235 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 DNAJC18Q9H819 358 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 TLDC2A0PJX2 215 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 NR3C1P04150 777 aa9.97□□□□□ -0.81
MSH4-201ENST00000263187 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms